Pseudomonas aeruginosa (ID 393338) - BioProject

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Accession: PRJNA393338 ID: 393338

Pseudomonas aeruginosa

Pseudomonas aeruginosa Environmental Isolate Sequencing

See Genome Information for Pseudomonas aeruginosa

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2075 additional projects are related by organism.

Whole-genome sequencing of non-clinical Pseudomonas aeruginosa isolates

Accession	PRJNA393338
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Pseudomonas aeruginosa[Taxonomy ID: 287] Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
Publications	Feltman H et al., "Prevalence of type III secretion genes in clinical and environmental isolates of Pseudomonas aeruginosa.", Microbiology (Reading), 2001 Oct;147(Pt 10):2659-2669
Grants	"Novel Pathogenicity islands of Pseudomonas aeruginosa" (Grant ID K02 AI065615, National Institute of Allergy and Infectious Diseases Extramural Activities) "Pseudomonas aeruginosa Genomic Islands and Virulence" (Grant ID R01 AI075191, National Institute of Allergy and Infectious Diseases Extramural Activities) "Accessory Virulence Factors of Pseudomonas aeruginosa" (Grant ID R01 AI118257, National Institute of Allergy and Infectious Diseases Extramural Activities) "Mediators of infection in the Pseudomonas aeruginosa accessory genome" (Grant ID MRSG-13-220-01 - MPC, American Cancer Society)
Submission	Registration date: 1-Aug-2017 Northwestern University Feinberg School of Medicine
Relevance	Evolution

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	13884
WGS master	129
Protein Sequences	793683
Publications
PubMed	1
Other datasets
BioSample	130
Assembly	129

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

129
129

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_002239545.1	NLBF00000000	SAMN07327856	Env_11	Pseudomonas aeruginosa
GCA_002239565.1	NLBG00000000	SAMN07327855	Env_1	Pseudomonas aeruginosa
GCA_002239485.1	NLBA00000000	SAMN07327864	Env_47	Pseudomonas aeruginosa
GCA_002239445.1	NLBE00000000	SAMN07327857	Env_12	Pseudomonas aeruginosa
GCA_002239425.1	NLBD00000000	SAMN07327858	Env_14	Pseudomonas aeruginosa
GCA_002239535.1	NLBC00000000	SAMN07327860	Env_16	Pseudomonas aeruginosa
GCA_002239505.1	NLBB00000000	SAMN07327861	Env_32	Pseudomonas aeruginosa
GCA_002239465.1	NLAY00000000	SAMN07327886	Env_62	Pseudomonas aeruginosa
GCA_002239415.1	NLAZ00000000	SAMN07327866	Env_58	Pseudomonas aeruginosa
GCA_002285375.1	NRET00000000	SAMN07504892	SJU-W20_2	Pseudomonas aeruginosa
GCA_002285355.1	NRFH00000000	SAMN07504878	SJU-S6_3	Pseudomonas aeruginosa
GCA_002285345.1	NRFL00000000	SAMN07504874	SJU-R10_2	Pseudomonas aeruginosa
GCA_002285195.1	NQZU00000000	SAMN07504845	P27b	Pseudomonas aeruginosa
GCA_002330955.1	NRBN00000000	SAMN07504785	env084	Pseudomonas aeruginosa
GCA_002332165.1	NRGM00000000	SAMN07504779	env051b	Pseudomonas aeruginosa
GCA_002332125.1	NRGL00000000	SAMN07504789	env097	Pseudomonas aeruginosa
GCA_002332135.1	NRGF00000000	SAMN07504810	env140	Pseudomonas aeruginosa
GCA_002332085.1	NRGJ00000000	SAMN07504801	env110b	Pseudomonas aeruginosa
GCA_002332095.1	NRGK00000000	SAMN07504796	env105	Pseudomonas aeruginosa
GCA_002332065.1	NRGI00000000	SAMN07504803	env113b	Pseudomonas aeruginosa
GCA_002332015.1	NRGG00000000	SAMN07504806	env135	Pseudomonas aeruginosa
GCA_002332035.1	NRGH00000000	SAMN07504805	env133	Pseudomonas aeruginosa
GCA_002331995.1	NRGE00000000	SAMN07504819	env169	Pseudomonas aeruginosa
GCA_002331985.1	NRGD00000000	SAMN07504822	env187	Pseudomonas aeruginosa
GCA_002332175.1	NRGN00000000	SAMN07504787	env092a	Pseudomonas aeruginosa
GCA_002326745.1	NRAM00000000	SAMN07504812	env144b	Pseudomonas aeruginosa
GCA_002326725.1	NRAL00000000	SAMN07504813	env145a	Pseudomonas aeruginosa
GCA_002326675.1	NRAK00000000	SAMN07504814	env146b	Pseudomonas aeruginosa
GCA_002326685.1	NRAH00000000	SAMN07504817	env159b	Pseudomonas aeruginosa
GCA_002326665.1	NRAD00000000	SAMN07504824	env193	Pseudomonas aeruginosa
GCA_002326605.1	NQZZ00000000	SAMN07504835	env241a	Pseudomonas aeruginosa
GCA_002326625.1	NRAB00000000	SAMN07504833	env225	Pseudomonas aeruginosa
GCA_002326595.1	NQZY00000000	SAMN07504838	env331b	Pseudomonas aeruginosa
GCA_002326585.1	NQZV00000000	SAMN07504843	env406b	Pseudomonas aeruginosa
GCA_002326515.1	NQZK00000000	SAMN07504856	S21a	Pseudomonas aeruginosa
GCA_002326535.1	NQZS00000000	SAMN07504847	P28b	Pseudomonas aeruginosa
GCA_002326525.1	NQZM00000000	SAMN07504854	S14b	Pseudomonas aeruginosa
GCA_002326505.1	NRAJ00000000	SAMN07504815	env158	Pseudomonas aeruginosa
GCA_002326455.1	NRAI00000000	SAMN07504816	env159a	Pseudomonas aeruginosa
GCA_002326435.1	NRAF00000000	SAMN07504820	env172	Pseudomonas aeruginosa
GCA_002326445.1	NRAG00000000	SAMN07504818	env165	Pseudomonas aeruginosa
GCA_002326425.1	NRAE00000000	SAMN07504821	env179	Pseudomonas aeruginosa
GCA_002326395.1	NRAC00000000	SAMN07504831	env210	Pseudomonas aeruginosa
GCA_002326365.1	NRAA00000000	SAMN07504834	env238	Pseudomonas aeruginosa
GCA_002326345.1	NQZW00000000	SAMN07504841	env396a	Pseudomonas aeruginosa
GCA_002326355.1	NQZX00000000	SAMN07504840	env345	Pseudomonas aeruginosa
GCA_002326325.1	NQZT00000000	SAMN07504846	P28a	Pseudomonas aeruginosa
GCA_002326305.1	NQZR00000000	SAMN07504848	S1e	Pseudomonas aeruginosa
GCA_002326275.1	NQZQ00000000	SAMN07504850	S1g	Pseudomonas aeruginosa
GCA_002326265.1	NQZP00000000	SAMN07504851	S1h	Pseudomonas aeruginosa
GCA_002326245.1	NQZO00000000	SAMN07504852	S8b-1	Pseudomonas aeruginosa
GCA_002326185.1	NQZI00000000	SAMN07504858	S30a	Pseudomonas aeruginosa
GCA_002326205.1	NQZN00000000	SAMN07504853	S8b-3	Pseudomonas aeruginosa
GCA_002326195.1	NQZL00000000	SAMN07504855	S20b	Pseudomonas aeruginosa
GCA_002326165.1	NQZG00000000	SAMN07504860	U1j-3	Pseudomonas aeruginosa
GCA_002326125.1	NQZC00000000	SAMN07504864	W1c	Pseudomonas aeruginosa
GCA_002326115.1	NQYX00000000	SAMN07504869	W13a-2	Pseudomonas aeruginosa
GCA_002326095.1	NQYW00000000	SAMN07504870	W21b-2	Pseudomonas aeruginosa
GCA_002325955.1	NQZA00000000	SAMN07504866	W1g	Pseudomonas aeruginosa
GCA_002326085.1	NQZJ00000000	SAMN07504857	S25b-2	Pseudomonas aeruginosa
GCA_002326055.1	NQZH00000000	SAMN07504859	U1i	Pseudomonas aeruginosa
GCA_002326045.1	NQZF00000000	SAMN07504861	U1o-2	Pseudomonas aeruginosa
GCA_002326025.1	NQZE00000000	SAMN07504862	U5a-2	Pseudomonas aeruginosa
GCA_002325985.1	NQZD00000000	SAMN07504863	U5b-2	Pseudomonas aeruginosa
GCA_002325965.1	NQZB00000000	SAMN07504865	W1d	Pseudomonas aeruginosa
GCA_002325945.1	NQYZ00000000	SAMN07504867	W1j	Pseudomonas aeruginosa
GCA_002325925.1	NQYY00000000	SAMN07504868	W5a-2	Pseudomonas aeruginosa
GCA_002330925.1	NRBP00000000	SAMN07504786	env091	Pseudomonas aeruginosa
GCA_002330865.1	NRBO00000000	SAMN07504784	env079	Pseudomonas aeruginosa
GCA_002330875.1	NRBK00000000	SAMN07504776	env043	Pseudomonas aeruginosa
GCA_002330885.1	NRBE00000000	SAMN07504783	env068	Pseudomonas aeruginosa
GCA_002330835.1	NRBI00000000	SAMN07504778	env050	Pseudomonas aeruginosa
GCA_002330805.1	NRBB00000000	SAMN07504791	env100	Pseudomonas aeruginosa
GCA_002330815.1	NRBC00000000	SAMN07504790	env099	Pseudomonas aeruginosa
GCA_002330775.1	NRBA00000000	SAMN07504792	env101	Pseudomonas aeruginosa
GCA_002330765.1	NRAY00000000	SAMN07504794	env103	Pseudomonas aeruginosa
GCA_002330735.1	NRAW00000000	SAMN07504797	env107	Pseudomonas aeruginosa
GCA_002330725.1	NRAV00000000	SAMN07504798	env108	Pseudomonas aeruginosa
GCA_002330695.1	NRAU00000000	SAMN07504799	env109b	Pseudomonas aeruginosa
GCA_002330675.1	NRAR00000000	SAMN07504804	env126	Pseudomonas aeruginosa
GCA_002330665.1	NRAP00000000	SAMN07504808	env138	Pseudomonas aeruginosa
GCA_002330605.1	NRGC00000000	SAMN07504823	env189	Pseudomonas aeruginosa
GCA_002330625.1	NRAO00000000	SAMN07504809	env139	Pseudomonas aeruginosa
GCA_002330585.1	NRFW00000000	SAMN07504830	env207	Pseudomonas aeruginosa
GCA_002330595.1	NRGA00000000	SAMN07504826	env201	Pseudomonas aeruginosa
GCA_002330555.1	NRFV00000000	SAMN07504832	env224	Pseudomonas aeruginosa
GCA_002330525.1	NRFS00000000	SAMN07504839	env334	Pseudomonas aeruginosa
GCA_002330515.1	NRBM00000000	SAMN07504774	env005	Pseudomonas aeruginosa
GCA_002330505.1	NRFQ00000000	SAMN07504844	env408	Pseudomonas aeruginosa
GCA_002330475.1	NRBJ00000000	SAMN07504777	env045	Pseudomonas aeruginosa
GCA_002330465.1	NRBL00000000	SAMN07504775	env006b	Pseudomonas aeruginosa
GCA_002330435.1	NRBH00000000	SAMN07504780	env054	Pseudomonas aeruginosa
GCA_002330425.1	NRBG00000000	SAMN07504781	env065a	Pseudomonas aeruginosa
GCA_002330395.1	NRBF00000000	SAMN07504782	env065b	Pseudomonas aeruginosa
GCA_002330385.1	NRBD00000000	SAMN07504788	env092b	Pseudomonas aeruginosa
GCA_002330355.1	NRAZ00000000	SAMN07504793	env102	Pseudomonas aeruginosa
GCA_002330345.1	NRAX00000000	SAMN07504795	env104	Pseudomonas aeruginosa
GCA_002330305.1	NRAS00000000	SAMN07504802	env113a	Pseudomonas aeruginosa
GCA_002330315.1	NRAT00000000	SAMN07504800	env110a	Pseudomonas aeruginosa
GCA_002330275.1	NRAQ00000000	SAMN07504807	env137a	Pseudomonas aeruginosa
GCA_002330255.1	NRAN00000000	SAMN07504811	env142	Pseudomonas aeruginosa
GCA_002330235.1	NRGB00000000	SAMN07504825	env199	Pseudomonas aeruginosa
GCA_002330215.1	NRFZ00000000	SAMN07504827	env202	Pseudomonas aeruginosa
GCA_002330165.1	NRFU00000000	SAMN07504836	env241b	Pseudomonas aeruginosa
GCA_002330205.1	NRFY00000000	SAMN07504828	env203	Pseudomonas aeruginosa
GCA_002330175.1	NRFX00000000	SAMN07504829	env204	Pseudomonas aeruginosa
GCA_002330135.1	NRFT00000000	SAMN07504837	env299	Pseudomonas aeruginosa
GCA_002330125.1	NRFR00000000	SAMN07504842	env396b	Pseudomonas aeruginosa
GCA_002330095.1	NREX00000000	SAMN07504888	SJU-W4_1	Pseudomonas aeruginosa
GCA_002330075.1	NREW00000000	SAMN07504889	SJU-W4_2	Pseudomonas aeruginosa
GCA_002330065.1	NRFP00000000	SAMN07504849	S1f	Pseudomonas aeruginosa
GCA_002330045.1	NRFG00000000	SAMN07504879	SJU-S9_1	Pseudomonas aeruginosa
GCA_002330015.1	NRFF00000000	SAMN07504880	SJU-S9_2	Pseudomonas aeruginosa
GCA_002330005.1	NREZ00000000	SAMN07504886	SJU-S79_2	Pseudomonas aeruginosa
GCA_002329975.1	NRFO00000000	SAMN07504871	SJU-R8_2	Pseudomonas aeruginosa
GCA_002329965.1	NRFN00000000	SAMN07504872	SJU-R8_3	Pseudomonas aeruginosa
GCA_002329925.1	NRFK00000000	SAMN07504875	SJU-R10_3	Pseudomonas aeruginosa
GCA_002329935.1	NRFM00000000	SAMN07504873	SJU-R10_1	Pseudomonas aeruginosa
GCA_002329905.1	NRFJ00000000	SAMN07504876	SJU-S6_1	Pseudomonas aeruginosa
GCA_002329885.1	NRFI00000000	SAMN07504877	SJU-S6_2	Pseudomonas aeruginosa
GCA_002329865.1	NRFE00000000	SAMN07504881	SJU-S9_3	Pseudomonas aeruginosa
GCA_002329845.1	NRFD00000000	SAMN07504882	SJU-S72_1	Pseudomonas aeruginosa
GCA_002329815.1	NRFC00000000	SAMN07504883	SJU-S72_2	Pseudomonas aeruginosa
GCA_002329805.1	NRFB00000000	SAMN07504884	SJU-S72_3	Pseudomonas aeruginosa
GCA_002329765.1	NREY00000000	SAMN07504887	SJU-S79_3	Pseudomonas aeruginosa
GCA_002329775.1	NRFA00000000	SAMN07504885	SJU-S79_1	Pseudomonas aeruginosa
GCA_002329725.1	NRES00000000	SAMN07504893	SJU-W20_3	Pseudomonas aeruginosa
GCA_002329735.1	NREU00000000	SAMN07504891	SJU-W20_1	Pseudomonas aeruginosa
GCA_002516415.1	NREV00000000	SAMN07504890	SJU-W4_3	Pseudomonas aeruginosa

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Pseudomonas aeruginosa Environmental Isolate Sequencing

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