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Accession: PRJNA396809 ID: 396809

Saccharomyces cerevisiae strain whole genome shotgun sequence

We performed phenotypic profiling and high coverage genome re-sequencing of 106 wild S. More...
AccessionPRJNA396809
Data TypeGenome sequencing and assembly
ScopeMultispecies
PublicationsDuan SF et al., "The origin and adaptive evolution of domesticated populations of yeast from Far East Asia.", Nat Commun, 2018 Jul 12;9(1):2690
SubmissionRegistration date: 2-Aug-2017
Institute Of Microbiology Chinese Academy of Sciences
RelevanceEvolution
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)4522
WGS master266
SRA Experiments266
Publications
PubMed1
PMC1
Other datasets
BioSample266
Assembly266
Assembly details:
Assembly levelNumber of Assemblies
1
264
265
AssemblyLevelWGSChrsBioSampleStrainTaxonomy
GCA_003273985.1ChromosomeNPSZ00000000SAMN07436964
CJM6.2
GCA_003272415.1ChromosomeNPSY00000000SAMN07436965
DJM4.1
GCA_003272405.1ChromosomeNPSX00000000SAMN07436966
GS1
GCA_003272315.1ChromosomeNPSW00000000SAMN07436967
GS5.6
GCA_003272305.1ChromosomeNPSV00000000SAMN07436968
GS5.7
GCA_003273955.1ChromosomeNPSU00000000SAMN07436969
GS6
GCA_003272295.1ChromosomeNPST00000000SAMN07436970
JM13.2
GCA_003272285.1ChromosomeNPSS00000000SAMN07436971
JM14.3
GCA_003273935.1ChromosomeNPSR00000000SAMN07436972
JM22.1
GCA_003273925.1ChromosomeNPSQ00000000SAMN07436973
JM37.2
GCA_003272195.1ChromosomeNPSP00000000SAMN07436974
JM4.8
GCA_003272175.1ChromosomeNPSO00000000SAMN07436975
JM8.3
GCA_003272185.1ChromosomeNPSN00000000SAMN07436976
NX7.1
GCA_003272165.1ChromosomeNPSM00000000SAMN07436977
QH7.3
GCA_003272075.1ChromosomeNPSL00000000SAMN07436978
SXJM1.1
GCA_003273835.1ChromosomeNPSK00000000SAMN07436979
SXJM9.5
GCA_003273825.1ChromosomeNPSJ00000000SAMN07436980
WL1
GCA_003273815.1ChromosomeNPSI00000000SAMN07436981
WL2
GCA_003272055.1ChromosomeNPSH00000000SAMN07436982
WL4
GCA_003272045.1ChromosomeNPSG00000000SAMN07436983
NX8.1
GCA_003273805.1ChromosomeNPSF00000000SAMN07436984
GS3.1
GCA_003272065.1ChromosomeNPSD00000000SAMN07436986
QH2.1
GCA_003273725.1ChromosomeNPSE00000000SAMN07436985
QH1.1
GCA_003271955.1ChromosomeNPSC00000000SAMN07436987
QH3.1
GCA_003271945.1ChromosomeNPSB00000000SAMN07436988
NX4.1
GCA_003271925.1ChromosomeNPSA00000000SAMN07436989
QH6.5
GCA_003273685.1ChromosomeNPRP00000000SAMN07437000
XZ3.1
GCA_003273625.1ChromosomeNPRO00000000SAMN07437001
XZ4.1
GCA_003273585.1ChromosomeNPRN00000000SAMN07437002
XZ4.2
GCA_003271705.1ChromosomeNPRM00000000SAMN07437003
XZ7
GCA_003271645.1ChromosomeNPRL00000000SAMN07437004
XZ10.1
GCA_003271555.1ChromosomeNPRK00000000SAMN07437005
JL2
GCA_003271505.1ChromosomeNPRJ00000000SAMN07437006
JQ9.3
GCA_003271545.1ChromosomeNPRH00000000SAMN07437008
JQ9.4
GCA_003271565.1ChromosomeNPRI00000000SAMN07437007
HN5.1
GCA_003273575.1ChromosomeNPRG00000000SAMN07437009
TY1.4
GCA_003271535.1ChromosomeNPRF00000000SAMN07437010
TY1.5
GCA_003271475.1ChromosomeNPRE00000000SAMN07437011
TY2.1
GCA_003271425.1ChromosomeNPRD00000000SAMN07437012
TY3.9
GCA_003273555.1ChromosomeNPRC00000000SAMN07437013
GZLJ3.1
GCA_003273535.1ChromosomeNPRB00000000SAMN07437014
GZLJ3.19
GCA_003273495.1ChromosomeNPRA00000000SAMN07437015
GZLJ3.22
GCA_003271835.1ChromosomeNPRX00000000SAMN07436992
BM5.1
GCA_003273705.1ChromosomeNPRZ00000000SAMN07436990
QH7.2
GCA_003271935.1ChromosomeNPRY00000000SAMN07436991
QH7.4
GCA_003271825.1ChromosomeNPRW00000000SAMN07436993
JM28.13
GCA_003273695.1ChromosomeNPRV00000000SAMN07436994
JM28.2
GCA_003271815.1ChromosomeNPRU00000000SAMN07436995
YM3.1
GCA_003271805.1ChromosomeNPRT00000000SAMN07436996
HN2.2
GCA_003271695.1ChromosomeNPRR00000000SAMN07436998
JT49.4
GCA_003271775.1ChromosomeNPRS00000000SAMN07436997
SXJM6.6
GCA_003271675.1ChromosomeNPRQ00000000SAMN07436999
XZ2.1
GCA_003277725.1ChromosomeNPYH00000000SAMN07436825
SX1
GCA_003277115.1ChromosomeNPYJ00000000SAMN07436823
HN6
GCA_003277205.1ChromosomeNPYK00000000SAMN07436822
HN5
GCA_003277105.1ChromosomeNPYI00000000SAMN07436824
HN7
GCA_003277245.1ChromosomeNPYL00000000SAMN07436821
HN4
GCA_003277235.1ChromosomeNPYN00000000SAMN07436819
HN2
GCA_003277255.1ChromosomeNPYO00000000SAMN07436818
HN1
GCA_003277295.1ChromosomeNPYP00000000SAMN07436817
FJ10
GCA_003277355.1ChromosomeNPYQ00000000SAMN07436816
FJ9
GCA_003277365.1ChromosomeNPYR00000000SAMN07436815
FJ8
GCA_003277375.1ChromosomeNPYS00000000SAMN07436814
FJ7
GCA_003277385.1ChromosomeNPYT00000000SAMN07436813
FJ5
GCA_003277475.1ChromosomeNPYU00000000SAMN07436812
XXYS14.1
GCA_003277485.1ChromosomeNPYW00000000SAMN07436810
XXY30L.2
GCA_003277495.1ChromosomeNPYX00000000SAMN07436809
XXY26L.1
GCA_003277505.1ChromosomeNPYZ00000000SAMN07436807
JXXY10.1
GCA_003277865.1ChromosomeNPYY00000000SAMN07436808
JXXY16.1
GCA_003277755.1ChromosomeNPYM00000000SAMN07436820
HN3
GCA_003277815.1ChromosomeNPYV00000000SAMN07436811
XXYS1.4
GCA_003277875.1ChromosomeNPZA00000000SAMN07436912
BS
GCA_003276375.1ChromosomeNPVJ00000000SAMN07436901
SD4
GCA_003276405.1ChromosomeNPVT00000000SAMN07436891
XJ3
GCA_003276485.1ChromosomeNPVX00000000SAMN07436887
SD3
GCA_003276495.1ChromosomeNPWC00000000SAMN07436882
HLJ2
GCA_003276505.1ChromosomeNPWE00000000SAMN07436880
FJ1
GCA_003276515.1ChromosomeNPWP00000000SAMN07436869
HN14
GCA_003276605.1ChromosomeNPWU00000000SAMN07436864
FJ2
GCA_003275215.1ChromosomeNPVZ00000000SAMN07436885
SD1
GCA_003275125.1ChromosomeNPVY00000000SAMN07436886
SD2
GCA_003275105.1ChromosomeNPVV00000000SAMN07436889
SX11
GCA_003275115.1ChromosomeNPVW00000000SAMN07436888
SX10
GCA_003275095.1ChromosomeNPVU00000000SAMN07436890
XJ1
GCA_003275005.1ChromosomeNPVR00000000SAMN07436893
XJ7
GCA_003274985.1ChromosomeNPVS00000000SAMN07436892
XJ6
GCA_003274975.1ChromosomeNPVQ00000000SAMN07436894
YN1
GCA_003274995.1ChromosomeNPVP00000000SAMN07436895
YN3
GCA_003274905.1ChromosomeNPVO00000000SAMN07436896
YN4
GCA_003274865.1ChromosomeNPVM00000000SAMN07436898
YN6
GCA_003274855.1ChromosomeNPVK00000000SAMN07436900
JL3
GCA_003274845.1ChromosomeNPVL00000000SAMN07436899
JL1
GCA_003274825.1ChromosomeNPVG00000000SAMN07436904
BJ9
GCA_003274735.1ChromosomeNPVF00000000SAMN07436905
BJ10
GCA_003275615.1ChromosomeNPWS00000000SAMN07436866
FJ4
GCA_003275605.1ChromosomeNPWR00000000SAMN07436867
FJ6
GCA_003275585.1ChromosomeNPWQ00000000SAMN07436868
HN13
GCA_003275575.1ChromosomeNPWO00000000SAMN07436870
HN15
GCA_003275475.1ChromosomeNPWM00000000SAMN07436872
HN17
GCA_003275455.1ChromosomeNPWK00000000SAMN07436874
SX9
GCA_003275365.1ChromosomeNPWI00000000SAMN07436876
ZJ2
GCA_003275345.1ChromosomeNPWH00000000SAMN07436877
BJ4
GCA_003275245.1ChromosomeNPWD00000000SAMN07436881
FJ12
GCA_003275225.1ChromosomeNPWB00000000SAMN07436883
HLJ3
GCA_003275235.1ChromosomeNPWA00000000SAMN07436884
JL4
GCA_003275335.1ChromosomeNPWG00000000SAMN07436878
BJ7
GCA_003275385.1ChromosomeNPWJ00000000SAMN07436875
ZJ1
GCA_003275685.1ChromosomeNPWT00000000SAMN07436865
FJ3
GCA_003275745.1ChromosomeNPWX00000000SAMN07436861
JHBMY20.1
GCA_003275755.1ChromosomeNPWW00000000SAMN07436862
JXXY1.1
GCA_003275785.1ChromosomeNPWY00000000SAMN07436860
GT99.1
GCA_003275715.1ChromosomeNPWV00000000SAMN07436863
NGS21L.1
GCA_003275505.1ChromosomeNPWN00000000SAMN07436871
HN16
GCA_003275465.1ChromosomeNPWL00000000SAMN07436873
HN18
GCA_003274725.1ChromosomeNPVE00000000SAMN07436906
BJ11
GCA_003274705.1ChromosomeNPVB00000000SAMN07436909
AF
GCA_003275825.1ChromosomeNPWZ00000000SAMN07436859
GT39.1
GCA_003274715.1ChromosomeNPVD00000000SAMN07436907
BJ13
GCA_003276295.1ChromosomeNPVC00000000SAMN07436908
XJ4
GCA_003276325.1ChromosomeNPVH00000000SAMN07436903
BJ5
GCA_003276245.1ChromosomeNPVA00000000SAMN07436910
AFB.1
GCA_003276365.1ChromosomeNPVI00000000SAMN07436902
BJ2
GCA_003276395.1ChromosomeNPVN00000000SAMN07436897
YN5
GCA_003276615.1ChromosomeNPXD00000000SAMN07436855
HN11
GCA_003276635.1ChromosomeNPXH00000000SAMN07436851
JL5
GCA_003276725.1ChromosomeNPXI00000000SAMN07436850
HLJ1
GCA_003276735.1ChromosomeNPXK00000000SAMN07436848
BJ26
GCA_003276875.1ChromosomeNPXW00000000SAMN07436836
BJ14
GCA_003276745.1ChromosomeNPXM00000000SAMN07436846
BJ24
GCA_003276755.1ChromosomeNPXN00000000SAMN07436845
BJ23
GCA_003276845.1ChromosomeNPXS00000000SAMN07436840
BJ18
GCA_003276855.1ChromosomeNPXO00000000SAMN07436844
BJ22
GCA_003276965.1ChromosomeNPXY00000000SAMN07436834
BJ6
GCA_003276975.1ChromosomeNPYA00000000SAMN07436832
SX8
GCA_003276995.1ChromosomeNPYD00000000SAMN07436829
SX5
GCA_003276865.1ChromosomeNPXT00000000SAMN07436839
BJ17
GCA_003277095.1ChromosomeNPYG00000000SAMN07436826
SX2
GCA_003277615.1ChromosomeNPXX00000000SAMN07436835
BJ8
GCA_003277595.1ChromosomeNPXU00000000SAMN07436838
BJ16
GCA_003276985.1ChromosomeNPYB00000000SAMN07436831
SX7
GCA_003277085.1ChromosomeNPYF00000000SAMN07436827
SX3
GCA_003277635.1ChromosomeNPXV00000000SAMN07436837
BJ15
GCA_003277715.1ChromosomeNPYC00000000SAMN07436830
SX6
GCA_003277735.1ChromosomeNPYE00000000SAMN07436828
SX4
GCA_003277645.1ChromosomeNPXZ00000000SAMN07436833
BJ3
GCA_003275875.1ChromosomeNPXB00000000SAMN07436857
FJ11
GCA_003275885.1ChromosomeNPXC00000000SAMN07436856
HN19
GCA_003275965.1ChromosomeNPXF00000000SAMN07436853
HN9
GCA_003275955.1ChromosomeNPXE00000000SAMN07436854
HN10
GCA_003276005.1ChromosomeNPXJ00000000SAMN07436849
BJ27
GCA_003276075.1ChromosomeNPXR00000000SAMN07436841
BJ19
GCA_003275835.1ChromosomeNPXA00000000SAMN07436858
FJSA40.2
GCA_003276015.1ChromosomeNPXL00000000SAMN07436847
BJ25
GCA_003276085.1ChromosomeNPXQ00000000SAMN07436842
BJ20
GCA_003276625.1ChromosomeNPXG00000000SAMN07436852
HN8
GCA_003272945.1ChromosomeNPTZ00000000SAMN07436938
XJ7.3
GCA_003274615.1ChromosomeNPUY00000000SAMN07436913
DBL.1
GCA_003274225.1ChromosomeNPTY00000000SAMN07436939
BT1.1
GCA_003272925.1ChromosomeNPTX00000000SAMN07436940
BT2.6
GCA_003274605.1ChromosomeNPUX00000000SAMN07436914
LSF.1
GCA_003276205.1ChromosomeNPUW00000000SAMN07436915
MLAF.1
GCA_003274215.1ChromosomeNPTW00000000SAMN07436941
BT2.8
GCA_003274595.1ChromosomeNPUV00000000SAMN07436916
SXJM4.1
GCA_003272905.1ChromosomeNPTV00000000SAMN07436942
BT3
GCA_003276185.1ChromosomeNPUU00000000SAMN07436917
XST
GCA_003274125.1ChromosomeNPTT00000000SAMN07436944
WL3
GCA_003274585.1ChromosomeNPUT00000000SAMN07436918
NX1
GCA_003274095.1ChromosomeNPTS00000000SAMN07436945
CJM19.5
GCA_003274495.1ChromosomeNPUS00000000SAMN07436919
NX2
GCA_003274485.1ChromosomeNPUR00000000SAMN07436920
NX3
GCA_003272855.1ChromosomeNPTR00000000SAMN07436946
CJM19.6
GCA_003274475.1ChromosomeNPUQ00000000SAMN07436921
XJ5
GCA_003272835.1ChromosomeNPTQ00000000SAMN07436947
CJM21.4
GCA_003274465.1ChromosomeNPUP00000000SAMN07436922
5-3004
GCA_003272755.1ChromosomeNPTO00000000SAMN07436949
CJM25.4
GCA_003274425.1ChromosomeNPUO00000000SAMN07436923
11-3002
GCA_003272725.1ChromosomeNPTN00000000SAMN07436950
CJM25.5
GCA_003276145.1ChromosomeNPUN00000000SAMN07436924
B1-1
GCA_003276135.1ChromosomeNPUM00000000SAMN07436925
C5-1
GCA_003274085.1ChromosomeNPTM00000000SAMN07436951
HN1.9
GCA_003274365.1ChromosomeNPUL00000000SAMN07436926
DX10-3
GCA_003272715.1ChromosomeNPTL00000000SAMN07436952
LJM21.1
GCA_003272705.1ChromosomeNPTK00000000SAMN07436953
LJM21.10
GCA_003274345.1ChromosomeNPUK00000000SAMN07436927
F3-4
GCA_003274055.1ChromosomeNPTJ00000000SAMN07436954
LJM21.3
GCA_003274325.1ChromosomeNPUJ00000000SAMN07436928
JZ1-4
GCA_003274025.1ChromosomeNPTI00000000SAMN07436955
LJM21.9
GCA_003274315.1ChromosomeNPUI00000000SAMN07436929
LM1-2
GCA_003272665.1ChromosomeNPTH00000000SAMN07436956
LJM6A.1
GCA_003273155.1ChromosomeNPUH00000000SAMN07436930
NQ13-1
GCA_003272625.1ChromosomeNPTG00000000SAMN07436957
LJM6A.4
GCA_003272595.1ChromosomeNPTF00000000SAMN07436958
WJM5.2
GCA_003273075.1ChromosomeNPUG00000000SAMN07436931
QH1-3
GCA_003272575.1ChromosomeNPTE00000000SAMN07436959
WJZ1.2
GCA_003273045.1ChromosomeNPUF00000000SAMN07436932
QH21-3
GCA_003274205.1ChromosomeNPUE00000000SAMN07436933
QH25-4
GCA_003272535.1ChromosomeNPTD00000000SAMN07436960
NX8.3
GCA_003274195.1ChromosomeNPUD00000000SAMN07436934
QH45-2
GCA_003273035.1ChromosomeNPUC00000000SAMN07436935
WM7-1
GCA_003272525.1ChromosomeNPTC00000000SAMN07436961
ANGGW.1
GCA_003273025.1ChromosomeNPUB00000000SAMN07436936
WM11-3
GCA_003272445.1ChromosomeNPTB00000000SAMN07436962
CJM11.1
GCA_003272975.1ChromosomeNPUA00000000SAMN07436937
XJ2
GCA_003272425.1ChromosomeNPTA00000000SAMN07436963
CJM20.1
GCA_003276235.1ChromosomeNPUZ00000000SAMN07436911
ANG1
GCA_003326555.1ChromosomeNPWF00000000SAMN07436879
BJ28
GCA_003326525.1ChromosomeNPXP00000000SAMN07436843
BJ21
GCA_003326515.1ChromosomeNPTU00000000SAMN07436943
BT4
GCA_003326565.1ChromosomeNPPO00000000SAMN07437053
JM28-16
GCA_003273405.1ChromosomeNPQU00000000SAMN07437021
HLJ4
GCA_003270695.1ChromosomeNPQC00000000SAMN07437039
JM32.8
GCA_003270665.1ChromosomeNPQB00000000SAMN07437040
JQ10.6
GCA_003271085.1ChromosomeNPQA00000000SAMN07437041
MJQ3.1
GCA_003270135.1ChromosomeNPOY00000000SAMN07437069
LJQ13C.1
GCA_003270185.1ChromosomeNPOX00000000SAMN07437070
LJZ22.1
GCA_003270175.1ChromosomeNPOW00000000SAMN07437071
MTJZ4
GCA_003270095.1ChromosomeNPOV00000000SAMN07437072
YN2
GCA_003270145.1ChromosomeNPOZ00000000SAMN07437068
LJQ13A.5
GCA_003271045.1ChromosomeNPPZ00000000SAMN07437042
MTJZ1
GCA_003270595.1ChromosomeNPPY00000000SAMN07437043
MTJZ2
GCA_003270575.1ChromosomeNPPX00000000SAMN07437044
2.591
GCA_003270565.1ChromosomeNPPW00000000SAMN07437045
155
GCA_003270985.1ChromosomeNPPV00000000SAMN07437046
168
GCA_003270955.1ChromosomeNPPU00000000SAMN07437047
229
GCA_003270945.1ChromosomeNPPT00000000SAMN07437048
427
GCA_003270535.1ChromosomeNPPS00000000SAMN07437049
502
GCA_003270935.1ChromosomeNPPQ00000000SAMN07437051
CJM24.1
GCA_003270455.1ChromosomeNPPP00000000SAMN07437052
HN6.1
GCA_003270465.1ChromosomeNPPR00000000SAMN07437050
BJ1
GCA_003270855.1ChromosomeNPPN00000000SAMN07437054
JQ8.3
GCA_003270825.1ChromosomeNPPL00000000SAMN07437056
JQHG.1
GCA_003270835.1ChromosomeNPPM00000000SAMN07437055
JQ8.4
GCA_003270815.1ChromosomeNPPK00000000SAMN07437057
JT10.10
GCA_003270435.1ChromosomeNPPJ00000000SAMN07437058
JT21.1
GCA_003270425.1ChromosomeNPPI00000000SAMN07437059
JT21.3
GCA_003270335.1ChromosomeNPPH00000000SAMN07437060
JT43.1
GCA_003270325.1ChromosomeNPPG00000000SAMN07437061
JT49.1
GCA_003270315.1ChromosomeNPPF00000000SAMN07437062
JT49.3
GCA_003270305.1ChromosomeNPPE00000000SAMN07437063
JT94.11
GCA_003270765.1ChromosomeNPPD00000000SAMN07437064
JTHB1
GCA_003270245.1ChromosomeNPPC00000000SAMN07437065
JZ10.1
GCA_003270715.1ChromosomeNPPA00000000SAMN07437067
LJQ131.6
GCA_003270205.1Complete genomeNPPB00000000SAMN07437066
LJQ13.C7
GCA_003273415.1ChromosomeNPQZ00000000SAMN07437016
GZLJ3.30
GCA_003271395.1ChromosomeNPQX00000000SAMN07437018
HLJ167
GCA_003273395.1ChromosomeNPQY00000000SAMN07437017
HLJ10
GCA_003271365.1ChromosomeNPQW00000000SAMN07437019
HLJ201
GCA_003273385.1ChromosomeNPQT00000000SAMN07437022
HLJ59
GCA_003271355.1ChromosomeNPQV00000000SAMN07437020
HLJ225
GCA_003271315.1ChromosomeNPQS00000000SAMN07437023
HZJZ4.5
GCA_003271225.1ChromosomeNPQP00000000SAMN07437026
MTJZ3
GCA_003271255.1ChromosomeNPQR00000000SAMN07437024
HZJZ5.4
GCA_003271245.1ChromosomeNPQQ00000000SAMN07437025
HZJZ5.5
GCA_003271185.1ChromosomeNPQO00000000SAMN07437027
MTZ13.12
GCA_003271135.1ChromosomeNPQN00000000SAMN07437028
2.1392
GCA_003273295.1ChromosomeNPQM00000000SAMN07437029
ANG.CJ.1
GCA_003271125.1ChromosomeNPQL00000000SAMN07437030
BQ1.1
GCA_003273285.1ChromosomeNPQK00000000SAMN07437031
BQ8.1
GCA_003273275.1ChromosomeNPQJ00000000SAMN07437032
BQ8.2
GCA_003273265.1ChromosomeNPQI00000000SAMN07437033
BTP1
GCA_003271115.1ChromosomeNPQG00000000SAMN07437035
HN3.8
GCA_003273165.1ChromosomeNPQF00000000SAMN07437036
HQ1.1
GCA_003273145.1ChromosomeNPQE00000000SAMN07437037
HQ3.1
GCA_003270705.1ChromosomeNPQD00000000SAMN07437038
JM32.3
GCA_003273175.1ChromosomeNPQH00000000SAMN07437034
CQJZ1.4
SRA Data Details
ParameterValue
Data volume, Gbases618
Data volume, Tbytes0.41

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