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Links from Nucleotide

Accession: PRJNA521418 ID: 521418

HAI2-naive strains of Pectobacterium from New Zealand

Conjugation assays to transfer HAI2, a genomic island present in Pectobacterium atrosepticum SCRI1043 associated with virulence of this pathogen in potato plants, were not successful despite the similarities of several proposed Erwinia recipient strains. More...
AccessionPRJNA521418
Data TypeGenome sequencing and assembly
ScopeMultispecies
SubmissionRegistration date: 7-Feb-2019
The New Zealand Institute for Plant and Food Research Ltd.
RelevanceAgricultural
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)22
Other datasets
BioSample22
Assembly22
Assembly details:
Assembly levelNumber of Assemblies
22
22
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_023507855.1ScaffoldSGPP00000000SAMN10887375
ICMP 9290
GCA_023508185.1ScaffoldSGQI00000000SAMN10887356
ICMP 1087
GCA_023508055.1ScaffoldSGQA00000000SAMN10887364
Ec-110
GCA_023507805.1ScaffoldSGPO00000000SAMN10887376
SCRI1043 DHAI2Dcas
GCA_023508205.1ScaffoldSGQH00000000SAMN10887357
ICMP 11525
GCA_023507725.1ScaffoldSGPN00000000SAMN10887377
SCRI1043 DHAI2
GCA_023507985.1ScaffoldSGPW00000000SAMN10887368
Ec-153
GCA_023507945.1ScaffoldSGPV00000000SAMN10887369
Ec-155
GCA_023508045.1ScaffoldSGQB00000000SAMN10887363
Ec-093
GCA_023507845.1ScaffoldSGPQ00000000SAMN10887374
Ec-180
GCA_023507825.1ScaffoldSGPR00000000SAMN10887373
Ec-179
GCA_023507925.1ScaffoldSGPU00000000SAMN10887370
Ec-168
GCA_023508105.1ScaffoldSGQE00000000SAMN10887360
Ec-008
GCA_023508155.1ScaffoldSGQF00000000SAMN10887359
Ec-007
GCA_023508145.1ScaffoldSGQG00000000SAMN10887358
Ec-006
GCA_023507885.1ScaffoldSGPS00000000SAMN10887372
Ec-177
GCA_023508125.1ScaffoldSGQD00000000SAMN10887361
Ec-009
GCA_023508065.1ScaffoldSGQC00000000SAMN10887362
Ec-010
GCA_023507905.1ScaffoldSGPT00000000SAMN10887371
Ec-173
GCA_023508025.1ScaffoldSGPZ00000000SAMN10887365
Ec-137
GCA_023508005.1ScaffoldSGPY00000000SAMN10887366
Ec-140
GCA_023507955.1ScaffoldSGPX00000000SAMN10887367
Ec-143

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