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Accession: PRJNA242847 ID: 242847

Salmonella enterica

GenomeTrakr Project: USDA - Food Safety and Inspection Service

See Genome Information for Salmonella enterica
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This project is a component of the Food and Drug Administration, Center for Food Safety and Applied Nutrition: FoodBorne Pathogen Research
This project is a component of the GenomeTrakr umbrella project for Salmonella enterica
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525 additional projects are components of the Food and Drug Administration, Center for Food Safety and Applied Nutrition: FoodBorne Pathogen Research.
75 additional projects are components of the GenomeTrakr umbrella project for Salmonella enterica.
3867 additional projects are related by organism.
CDC isolated strains of Salmonella enterica
AccessionPRJNA242847
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismSalmonella enterica[Taxonomy ID: 28901]
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Publications
  • Ge B et al., "Genomic analysis of azithromycin-resistant Salmonella from food animals at slaughter and processing, and retail meats, 2011-2021, United States.", Microbiol Spectr, 2024 Jan 11;12(1):e0348523
  • Li C et al., "The spread of pESI-mediated extended-spectrum cephalosporin resistance in Salmonella serovars-Infantis, Senftenberg, and Alachua isolated from food animal sources in the United States.", PLoS One, 2024;19(3):e0299354
SubmissionRegistration date: 12-May-2016
FDA
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)39866
WGS master39740
Genomic DNA68
SRA Experiments41545
Protein Sequences119688
Publications
PubMed2
PMC2
Other datasets
BioSample41577
Assembly39810
Supplementary data
Base modification3
SRA Data Details
ParameterValue
Data volume, Gbases19,752
Data volume, Tbytes11.98

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