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Links from Protein

Accession: PRJNA320100 ID: 320100

Rattus norvegicus breed:Sprague-Dawley (Norway rat)

PacBio SMRT sequencing of Ttc8 isoforms expressed in the rat pineal gland at night

See Genome Information for Rattus norvegicus
Long-read RNA-Seq generated using the Pacific Biosciences (PacBio) Single Molecule Real Time (SMRT) sequencing of a pooled set of PCR products generated using seven different primer pairs covering various combinations of known or predicted start/end sites in the Ttc8 gene.
AccessionPRJNA320100
Data TypeTranscriptome or Gene expression
OrganismRattus norvegicus[Taxonomy ID: 10116]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus; Rattus norvegicus
PublicationsHartley SW et al., "Alternative Isoform Analysis of Ttc8 Expression in the Rat Pineal Gland Using a Multi-Platform Sequencing Approach Reveals Neural Regulation.", PLoS One, 2016;11(9):e0163590
SubmissionRegistration date: 29-Apr-2016
NHGRI
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (Transcript)42
SRA Experiments1
Protein Sequences42
Publications
PubMed1
PMC1
Other datasets
BioSample1
SRA Data Details
ParameterValue
Data volume, Gbases1
Data volume, Mbytes387

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