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Links from Protein

Accession: PRJNA477426 ID: 477426

The Clostridium tetani pangenome

26 Clostridium tetani strains isolated between 1920 and 2017 were sequenced to determine the pan-genome and get insights in the evolutionary history
AccessionPRJNA477426
Data TypeGenome sequencing and assembly
ScopeMultispecies
PublicationsChapeton-Montes D et al., "The population structure of Clostridium tetani deduced from its pan-genome.", Sci Rep, 2019 Aug 2;9(1):11220
SubmissionRegistration date: 22-Jun-2018
Aarhus University
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)1214
WGS master26
Protein Sequences70017
Publications
PubMed1
PMC1
Other datasets
BioSample26
Assembly26
Assembly details:
Assembly levelNumber of Assemblies
1
25
26
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_004115705.1ContigQMDR00000000SAMN09469714
3483
GCA_004115905.1ContigQMAW00000000SAMN09469717
75.97
GCA_004115665.1ContigQMAO00000000SAMN09469725
778.17
GCA_004115655.1ContigQMAY00000000SAMN09469715
641.84
GCA_004115645.1ContigQMAZ00000000SAMN09469713
132CV
GCA_004115605.1ContigQMAU00000000SAMN09469719
63.05
GCA_004115575.1ContigQMBA00000000SAMN09469712
3582
GCA_004115585.1ContigQMAX00000000SAMN09469716
407.86
GCA_004115565.1ContigQMAQ00000000SAMN09469723
202.15
GCA_004115515.1ScaffoldQMAN00000000SAMN09469726
1337
GCA_004115505.1ContigQMAS00000000SAMN09469721
89.12
GCA_004115485.1ContigQMAV00000000SAMN09469718
358.99
GCA_004115495.1ContigQMAP00000000SAMN09469724
2017.061
GCA_004119405.1ContigQMBE00000000SAMN09469708
512-15
GCA_004119395.1ContigQMBD00000000SAMN09469709
B4
GCA_004119345.1ContigQMBH00000000SAMN09469705
1586-Z1
GCA_004119355.1ContigQMBL00000000SAMN09469701
Harvard
GCA_004119335.1ContigQMBG00000000SAMN09469706
1240
GCA_004119305.1ContigQMBB00000000SAMN09469711
TMB2
GCA_004119295.1ContigQMBC00000000SAMN09469710
COR1
GCA_004119205.1ContigQMBK00000000SAMN09469702
Strain 3
GCA_004119235.1ContigQMBJ00000000SAMN09469703
4784A
GCA_004119215.1ContigQMAR00000000SAMN09469722
157.15
GCA_004119225.1ContigQMAT00000000SAMN09469720
46.1.08
GCA_004119195.1ContigQMBI00000000SAMN09469704
1586-U1
GCA_004168545.1ContigQMBF00000000SAMN09469707
329

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