Vibrio vulnificus (ID 475262) - BioProject

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Accession: PRJNA475262 ID: 475262

Vibrio vulnificus

Genomic characterization of environmental Vibrio vulnificus from the northern Gulf of Mexico

See Genome Information for Vibrio vulnificus

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This project is a component of the GenomeTrakr Umbrella Project for Vibrio vulnificus

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4 additional projects are components of the GenomeTrakr Umbrella Project for Vibrio vulnificus.

165 additional projects are related by organism.

Genome sequencing of Vibrio vulnificus

Accession	PRJNA475262
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Vibrio vulnificus[Taxonomy ID: 672] Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio vulnificus
Publications	Ramirez GD et al., "Incidence of Vibrio vulnificus in estuarine waters of the south Texas Coastal Bend region.", J Appl Microbiol, 2009 Dec 1;107(6):2047-53
Submission	Registration date: 20-Feb-2019 FDA Center for Food Safety and Applied Nutrition
Related Resources	Department of Life Sciences, Texas A&M University-Corpus Christi, Corpus Christi, TX, USA
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	4016
WGS master	43
SRA Experiments	43
Protein Sequences	185828
Publications
PubMed	1
Other datasets
BioSample	43
Assembly	43

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

43
43

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_015790995.1	AAXNKG000000000	SAMN09386613	VA-WGS-18046	Vibrio vulnificus
GCA_004215355.1	RCGD00000000	SAMN09386617	VA-WGS-18022	Vibrio vulnificus
GCA_004215335.1	RCGB00000000	SAMN09386615	VA-WGS-18024	Vibrio vulnificus
GCA_004215325.1	RCGC00000000	SAMN09386616	VA-WGS-18023	Vibrio vulnificus
GCA_004215315.1	RCGA00000000	SAMN09386771	VA-WGS-18025	Vibrio vulnificus
GCA_004215295.1	RCFZ00000000	SAMN09386770	VA-WGS-18026	Vibrio vulnificus
GCA_004215255.1	RCFX00000000	SAMN09386781	VA-WGS-18028	Vibrio vulnificus
GCA_004215235.1	RCFW00000000	SAMN09386816	VA-WGS-18029	Vibrio vulnificus
GCA_004215225.1	RCFY00000000	SAMN09386776	VA-WGS-18027	Vibrio vulnificus
GCA_004215215.1	RCFV00000000	SAMN09386817	VA-WGS-18030	Vibrio vulnificus
GCA_004215195.1	RCFU00000000	SAMN09386749	VA-WGS-18031	Vibrio vulnificus
GCA_004215155.1	RCFT00000000	SAMN09386750	VA-WGS-18032	Vibrio vulnificus
GCA_004215145.1	RBWR00000000	SAMN09386618	VA-WGS-18064	Vibrio vulnificus
GCA_004215135.1	RBWQ00000000	SAMN09386737	VA-WGS-18063	Vibrio vulnificus
GCA_004215105.1	RBWP00000000	SAMN09386738	VA-WGS-18062	Vibrio vulnificus
GCA_004215095.1	RBWO00000000	SAMN09386619	VA-WGS-18061	Vibrio vulnificus
GCA_004215045.1	RBWK00000000	SAMN09386612	VA-WGS-18057	Vibrio vulnificus
GCA_004215035.1	RBWL00000000	SAMN09386611	VA-WGS-18058	Vibrio vulnificus
GCA_004215005.1	RBWJ00000000	SAMN09386614	VA-WGS-18056	Vibrio vulnificus
GCA_004215015.1	RBWN00000000	SAMN09386620	VA-WGS-18060	Vibrio vulnificus
GCA_004214995.1	RBWM00000000	SAMN09386621	VA-WGS-18059	Vibrio vulnificus
GCA_004214765.1	RBZL00000000	SAMN09386818	VA-WGS-18041	Vibrio vulnificus
GCA_004214755.1	RBZJ00000000	SAMN09386780	VA-WGS-18039	Vibrio vulnificus
GCA_004214715.1	RBZI00000000	SAMN09386768	VA-WGS-18043	Vibrio vulnificus
GCA_004214695.1	RBZK00000000	SAMN09386815	VA-WGS-18040	Vibrio vulnificus
GCA_004214675.1	RBZB00000000	SAMN09386753	VA-WGS-18033	Vibrio vulnificus
GCA_004214665.1	RBZH00000000	SAMN09386766	VA-WGS-18035	Vibrio vulnificus
GCA_004214655.1	RBZG00000000	SAMN09386765	VA-WGS-18036	Vibrio vulnificus
GCA_004214625.1	RBZE00000000	SAMN09386763	VA-WGS-18038	Vibrio vulnificus
GCA_004214595.1	RBZF00000000	SAMN09386764	VA-WGS-18037	Vibrio vulnificus
GCA_004214575.1	RBZD00000000	SAMN09386757	VA-WGS-18034	Vibrio vulnificus
GCA_004214555.1	RPGM00000000	SAMN09386767	VA-WGS-18044	Vibrio vulnificus
GCA_004214565.1	RBZC00000000	SAMN09386756	VA-WGS-18042	Vibrio vulnificus
GCA_004214525.1	RHHF00000000	SAMN09386624	VA-WGS-18048	Vibrio vulnificus
GCA_004214495.1	RHHL00000000	SAMN09386736	VA-WGS-18055	Vibrio vulnificus
GCA_004214475.1	RHHI00000000	SAMN09386759	VA-WGS-18051	Vibrio vulnificus
GCA_004214465.1	RHHD00000000	SAMN09386733	VA-WGS-18045	Vibrio vulnificus
GCA_004214455.1	RHHE00000000	SAMN09386622	VA-WGS-18047	Vibrio vulnificus
GCA_004214385.1	RHHH00000000	SAMN09386754	VA-WGS-18050	Vibrio vulnificus
GCA_004214395.1	RHHJ00000000	SAMN09386758	VA-WGS-18052	Vibrio vulnificus
GCA_004214365.1	RHHK00000000	SAMN09386734	VA-WGS-18054	Vibrio vulnificus
GCA_004214355.1	RHHG00000000	SAMN09386708	VA-WGS-18049	Vibrio vulnificus
GCA_004214375.1	RPGN00000000	SAMN09386735	VA-WGS-18053	Vibrio vulnificus

SRA Data Details

Parameter	Value
Data volume, Gbases	20
Data volume, Mbytes	12355

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Vibrio vulnificus

Genomic characterization of environmental Vibrio vulnificus from the northern Gulf of Mexico

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