Escherichia coli (ID 400628) - BioProject

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Accession: PRJNA400628 ID: 400628

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Metagenomic samples extracted from Stool of UI cases/control patients and 16S sequenced

Accession	PRJNA400628
Data Type	Genome sequencing and assembly
Scope	Multispecies
Organism	Escherichia coli[Taxonomy ID: 562] Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Grants	"Genomics of bacterial pathogens: host response, persistence and transmission" (Grant ID U19 AI110818, National Institute of Allergy and Infectious Diseases Extramural Activities)
Submission	Registration date: 25-Mar-2020 Broad Institute
Relevance	Medical

Project Data:

Assembly level

Number of Assemblies

1
11
12

Assembly	WGS	Chrs	BioSample	Strain	Taxonomy
GCA_011751245.1	JAAJTL000000000		SAMN12212560	UMB120101_06	Escherichia coli
GCA_011751215.1	JAAJTN000000000		SAMN12212558	UMB0100_18	Escherichia coli
GCA_011751425.1	JAAJTV000000000		SAMN12212549	UMB080201_08	Escherichia coli
GCA_011751405.1	JAAJTS000000000		SAMN12212552	UMB1800_15	Escherichia coli
GCA_011751375.1	JAAJTU000000000		SAMN12212550	UMB150101_13	Escherichia coli
GCA_011751355.1	JAAJTT000000000		SAMN12212551	UMB110301_19	Escherichia coli
GCA_011751345.1	JAAJTR000000000		SAMN12212553	UMB2000_07	Escherichia coli
GCA_011751325.1	JAAJTQ000000000		SAMN12212554	UMB1800_22	Escherichia coli
GCA_011751305.1	JAAJTP000000000		SAMN12212555	UMB1800_23	Escherichia coli
GCA_011751285.1	JAAJTO000000000		SAMN12212557	UMB2500_29	Escherichia coli
GCA_011064575.1		1	SAMN12212556	UMB200201_11	Escherichia coli
GCA_011751205.1	JAAJTM000000000		SAMN12212559	UMB2500_14	Escherichia marmotae

Parameter	Value
Data volume, Gbases	2,642
Data volume, Tbytes	1.19