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Accession: PRJDB10402 ID: 730125

Volvox strain:NIES-3786, NIES-3785 and NIES-3780

New Volvox genome assembly and annotation for genome comparison between homothallism and heterothallism

Volvox africanus (homothallic) and V. reticuliferus (heterothallic, male and female strain) genome for understanding molecular genetic basis of the evolution of homothallism.
AccessionPRJDB10402
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismVolvox[Taxonomy ID: 3066]
Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae; CS clade; Chlamydomonadales; Volvocaceae; Volvox
PublicationsYamamoto K et al., "Three genomes in the algal genus Volvox reveal the fate of a haploid sex-determining region after a transition to homothallism.", Proc Natl Acad Sci U S A, 2021 May 25;118(21)
Grants
  • "Platform for Advanced Genome Science (PAGS)" (Grant ID 16H06279, Japan Society for the Promotion of Science)
  • "Transition to multicellularity and evolution of female-male genders based on whole genome data" (Grant ID 18J11391, Japan Society for the Promotion of Science)
SubmissionRegistration date: 14-May-2021
Laboratory of Origin of Eukaryote Biodiversity, Department of Biological Sciences, Graduate School of Science, University of Tokyo
RelevanceEvolution
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)462
WGS master3
Genomic DNA6
SRA Experiments12
Protein Sequences68008
Publications
PubMed1
PMC1
Other datasets
BioSample9
Assembly3
Assembly details:
SRA Data Details
ParameterValue
Data volume, Gbases182
Data volume, Mbytes72092

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