Fungal endophytes (ID 786750) - BioProject

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Accession: PRJNA786750 ID: 786750

Whole genome sequencing and assembly of fungal endophytes from the culture collections at CABI.

Accession	PRJNA786750
Data Type	Genome sequencing and assembly
Scope	Multispecies
Publications	Published online: Hill R et al., "Tapping culture collections for fungal endophytes: first genome assemblies for three genera and five species in the Ascomycota", Genome Biology and Evolution, 2023;
Grants	"The London NERC DTP Partnership" (Grant ID NE/L002485/1, Natural Environmental Research Council) "Discovering the Fungal Tree of Life" (Grant ID NA, Evolution Education Trust)
Submission	Registration date: 7-Dec-2021 Royal Botanic Gardens, Kew
Relevance	Agricultural

Project Data:

Assembly level

Number of Assemblies

2
13
15

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_027946445.1	JAPEUW000000000	SAMN30184420	IMI 359910	Ascochyta clinopodiicola
GCA_027946355.1	JAPEUS000000000	SAMN30184425	IMI 366227	Collariella sp. IMI 366227
GCA_027942845.1	JAPUFF000000000	SAMN30184415	IMI 355084	Colletotrichum fioriniae
GCA_027942835.1	JAPUFE000000000	SAMN30184424	IMI 366226	Colletotrichum tropicale
GCA_027946415.1	JAPEUV000000000	SAMN30184421	IMI 360193	Didymella glomerata
GCA_027946535.1	JAPEVA000000000	SAMN30184416	IMI 355091	Didymella pomorum
GCA_027946495.1	JAPEUZ000000000	SAMN30184417	IMI 355093	Didymella sp. IMI 355093
GCA_027946475.1	JAPEUX000000000	SAMN30184419	IMI 356815	Didymosphaeria variabile
GCA_027946385.1	JAPEUR000000000	SAMN30184426	IMI 366586	Fusarium piperis
GCA_027946515.1	JAPEVB000000000	SAMN30184414	IMI 355082	Gnomoniopsis smithogilvyi
GCA_027946555.1	JAPEVC000000000	SAMN30184413	IMI 355080	Gnomoniopsis sp. IMI 355080
GCA_027946365.1	JAPEUQ000000000	SAMN30184427	IMI 367209	Kalmusia sp. IMI 367209
GCA_027946455.1	JAPEUY000000000	SAMN30184418	IMI 356814	Neocucurbitaria cava
GCA_027946375.1	JAPEUT000000000	SAMN30184423	IMI 364377	Neodidymelliopsis sp. IMI 364377
GCA_027946425.1	JAPEUU000000000	SAMN30184422	IMI 360204	Neurospora sp. IMI 360204

Parameter	Value
Data volume, Gbases	141
Data volume, Mbytes	65391

Related Project Category: RefseqGenbank

PRJNA973277 : CABI fungal endophytes genome sequencing and assembly