Cyprinodon variegatus isolate:N-32 (ID 308224) - BioProject

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Accession: PRJNA308224 ID: 308224

Cyprinodon variegatus isolate:N-32 (sheepshead minnow)

Cyprinodon variegatus isolate:N-32 RefSeq Genome sequencing

See Genome Information for Cyprinodon variegatus

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6 additional projects are related by organism.

The reference sequence (RefSeq) genome assembly is derived from the submitted GenBank assembly (see linked project PRJNA89149). Annotation provided on the RefSeq genomic records is based on NCBI annotation pipeline.

Accession	PRJNA308224
Data Type	RefSeq Genome sequencing
Scope	Monoisolate
Organism	Cyprinodon variegatus[Taxonomy ID: 28743] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontidae; Cyprinodon; Cyprinodon variegatus
Publications	Brix KV et al., "Comparative evaluation of Na(+) uptake in Cyprinodon variegatus variegatus (Lacepede) and Cyprinodon variegatus hubbsi (Carr) (Cyprinodontiformes, Teleostei): Evaluation of NHE function in high and low Na(+) freshwater.", Comp Biochem Physiol A Mol Integr Physiol, 2015 Jul;185:115-24 Lowe TM et al., "tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.", Nucleic Acids Res, 1997 Mar 1;25(5):955-64
Submission	Registration date: 17-Jul-2014 Aquatic Genome Models - Washington University School of Medicine - Washington University School of Medince
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	47135
Transcript	37877
Protein Sequences	36511
Publications
PubMed	2
PMC	1
Other datasets
BioSample	1
Assembly	1

Assembly details:

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Assembly	Level	WGS	Chrs	BioSample	Taxonomy
GCF_000732505.1	Scaffold	JPKM00000000	1	SAMN02736898	Cyprinodon variegatus

Related GenBank Project

PRJNA89149 : Cyprinodon variegatus isolate:N-32 Genome sequencing and assembly

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Cyprinodon variegatus isolate:N-32 (sheepshead minnow)

Cyprinodon variegatus isolate:N-32 RefSeq Genome sequencing

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