191-BKPyV-Assembly

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Result Filters

Organism: Betapolyomavirus hominis
Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Sepolyvirales; Polyomaviridae; Betapolyomavirus

Attributes

collection date	2017-01-24
broad-scale environmental context	human virome
local-scale environmental context	BKPyV-positive
environmental medium	blood
geographic location	Australia
investigation type	uncultivated viral genome
project name	Diversity of BK Polyomavirus genomes
sample name	191-ERS3143329
source of UViGs	blood metagenome from immunocompromised patient
virus enrichment approach	dRCA
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2019-02-15T17:03:27Z
ENA-LAST-UPDATE	2019-02-14T06:51:45Z
External Id	SAMEA5337342
INSDC center name	Centre for Infectious Diseases and Microbiology Laboratory Services
INSDC first public	2019-02-15T17:03:27Z
INSDC last update	2019-02-14T06:51:45Z
INSDC status	public
Submitter Id	191-ERS3143329
assembly quality	reads mapped to reference GenBank accession, V01108, average coverage is 3288
assembly software	CLC v9.0
common name	BKPyV
detection type	independent sequence
geographic location (latitude)	33.8688� S
geographic location (longitude)	151.2093� E
predicted genome structure	circle
predicted genome type	dsDNA
sample derived from	ERS3143329
scientific_name	Human polyomavirus 1
sequencing method	150bp paired end
viral identification software	Blastn v2.8.1+