Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Planigale ingrami
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Dasyuromorphia; Dasyuridae; Planigale

Attributes

geographic location	Australia
identified by	Catherine Kemper
investigation type	phylogenetic study
sample name	55325
sex	not determined
tissue	liver
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/2a538717-828d-455e-a40c-22ae798c0eb1
BPA_library_ID	55325
BPA_sample_ID	41914
CALLABLE	1439582
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:29Z
ENA-LAST-UPDATE	2020-09-25T00:42:20Z
External Id	SAMEA7321307
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:29Z
INSDC last update	2020-09-25T00:42:20Z
INSDC status	public
LOW_COVERAGE	155728
NO_COVERAGE	303
ReadLength	150bp
Submitter Id	55325
TCCP_ID	55325_HWWJFAFXY_ACGTATG_S58
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	Long-tailed planigale
decimal_latitude	-26.31
decimal_longitude	140.33
depthmean	57.09
depthmedian	45
family	Dasyuridae
genus	Planigale
geographic location (region and locality)	South Australia
institution_name	Australian Biological Tissue Collection, South Australian Museum
location_text	5.2km SSE, Elbow Well
order	Dasyuromorphia
phylum	Chordata
scientific_name	Planigale ingrami
sequencing method	Illumina SBS, short PE reads
species	ingrami
state_or_region	South Australia
tissue_number	ABTC34976
tissue_preservation	ethanol \| frozen
totalmapped2tgt	0.7719
totalpaired	0.7599
totalreadsstart	943935
voucher_number	SAMA M17906
voucher_or_tissue_number	SAMA M17906