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SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2

Identifiers
BioSample: SAMN41135694; Sample name: USAFSAM-S22610; SRA: SRS21204931
Organism
Severe acute respiratory syndrome coronavirus 2
Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Sarbecovirus; Severe acute respiratory syndrome-related coronavirus
Package
SARS-CoV-2: clinical or host-associated; version 1.0
Attributes
collected byCANNON AFB
collection date2024-04-08
geographic locationUSA: New Mexico
hostHomo sapiens
host diseaseCOVID-19
isolateSARS-CoV-2/Human/USA/NM-USAFSAM-S22610/2024
isolation sourceclinical
collection method Nasopharyngeal Swab
purpose of samplingDiagnostic Testing
host age34
host sexmale
prior SARS-CoV-2 vaccinationyes - completed
vaccine receivedCOVID-19 Pfizer
date of SARS-CoV-2 vaccination2022-01-26
purpose of sequencingBaseline surveillance (random sampling)
sequenced byUSAFSAM
GISAID accessionEPI_ISL_19082714
GISAID virus namehCoV-19/USA/NM-USAFSAM-S22610/2024
BioProject
PRJNA655789 Severe acute respiratory syndrome coronavirus 2
Retrieve all samples from this project

Submission
USAFSAM_PH; 2024-04-30
Accession:
SAMN41135694
ID:
41135694

SRA

Supplemental Content

Related information

  • SRA
    Links to SRA experiments
  • Taxonomy
    Links to Taxonomy

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