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Kaiser_macrophage_LPS

Identifiers
BioSample: SAMEA2812694; SRA: ERS565090
Organism
Gallus gallus (chicken)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Sauropsida; Sauria; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Attributes
cell typemacrophage
sample nameE-MTAB-2996:Kaiser_macrophage_LPS
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2015-01-19T17:03:08Z
ENA-LAST-UPDATE2018-03-08T20:12:40Z
External IdSAMEA2812694
INSDC center nameThe Roslin Institute
INSDC first public2015-01-19T17:03:08Z
INSDC last update2018-03-08T20:12:40Z
INSDC statuspublic
Submitter IdE-MTAB-2996:Kaiser_macrophage_LPS
broker nameArrayExpress
common namechicken
scientific_nameGallus gallus
Description

Protocols: Macrophages and dendritic cells were cultured from bone marrow by standard methods (Garceau et al. 2010 and Wu et al. 2010, respectively), and heterophils isolated from blood by standard methods (Kogut et al. 1995). Cells were cultured with or without LPS for 24 h before RNA was isolated Standard Trizol extraction method Samples were prepared for mRNA sequencing using 2ug of total RNA starting material following the Illumina TruSeq RNA Sample Preparation v2 kit protocol.

BioProject
PRJEB7475 Sequencing of LPS-stimulated immune cells from chicken
Retrieve all samples from this project

Submission
EBI; 2015-01-29
Accession:
SAMEA2812694
ID:
3313886

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