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Uncultivated Nitrospira sp. UBA4129 genome recovered from SRX731627

Identifiers
BioSample: SAMN06453221; Sample name: Nitrospira sp. UBA4129; SRA: SRS2036237
Organism
Nitrospira sp. UBA4129
cellular organisms; Bacteria; Nitrospirota; Nitrospiria; Nitrospirales; Nitrospiraceae; Nitrospira; unclassified Nitrospira
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationLuxembourg: Schifflange
isolateUBA4129
isolation sourcewater
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX731627 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated80.75%
contamination_estimated4.55%
environmental_sampletrue
genome_coverage7.34
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenome_sourcewastewater metagenome
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the wastewater metagenome reads: SRR1611149.
Description

Uncultivated genome recovered from an assembly of the SRX731627 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06453221
ID:
6453221

BioProject SRA Nucleotide

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