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Uncultivated Ruminococcaceae bacterium UBA1404 genome recovered from ERX250271

Identifiers
BioSample: SAMN06450959; Sample name: Ruminococcaceae bacterium UBA1404; SRA: SRS2030557
Organism
Ruminococcaceae bacterium UBA1404
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Clostridia; Eubacteriales; Oscillospiraceae; unclassified Oscillospiraceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationMalaysia
isolateUBA1404
isolation sourceclosed biodigester
metagenome sourcepalm oil mill effluent metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in ERX250271 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated97.32%
contamination_estimated2.07%
environmental_sampletrue
genome_coverage24.38
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the palm oil mill effluent metagenome reads: ERR276848.
Description

Uncultivated genome recovered from an assembly of the ERX250271 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06450959
ID:
6450959

BioProject SRA Nucleotide

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