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Uncultivated Nitrospiraceae bacterium UBA2600 genome recovered from SRX745164

Identifiers
BioSample: SAMN06456115; Sample name: Nitrospiraceae bacterium UBA2600; SRA: SRS2036262
Organism
Nitrospiraceae bacterium UBA2600
cellular organisms; Bacteria; Nitrospirota; Nitrospiria; Nitrospirales; Nitrospiraceae; unclassified Nitrospiraceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationSouth Africa:Carltonville
isolateUBA2600
isolation sourcewater
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX745164 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated92.12%
contamination_estimated0.00%
environmental_sampletrue
genome_coverage24.58
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenome_sourcegroundwater metagenome
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the groundwater metagenome reads: SRR1633224.
Description

Uncultivated genome recovered from an assembly of the SRX745164 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06456115
ID:
6456115

BioProject SRA Nucleotide

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