Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Bettongia gaimardi (Tasmanian bettong)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Diprotodontia; Potoroidae; Bettongia

Attributes

geographic location	Australia
investigation type	phylogenetic study
sample name	40095
sex	not determined
tissue	blood \| kidney \| liver
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/e7d67dc1-42ef-4b9f-b974-423ba742d4b8
BPA_library_ID	52726
BPA_sample_ID	40095
CALLABLE	602318
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:28Z
ENA-LAST-UPDATE	2020-09-25T00:33:45Z
External Id	SAMEA7321003
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:28Z
INSDC last update	2020-09-25T00:33:45Z
INSDC status	public
LOW_COVERAGE	66931
NO_COVERAGE	230
ReadLength	100bp
Submitter Id	40095
TCCP_ID	40095_LANES3
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	Tasmanian bettong
depthmean	101.4
depthmedian	30
family	Potoroidae
genus	Bettongia
geographic location (region and locality)	Tasmania
institution_name	Australian Biological Tissue Collection, South Australian Museum
location_text	Lilydale
order	Diprotodontia
phylum	Chordata
scientific_name	Bettongia gaimardi
sequencing method	Illumina SBS, short PE reads
species	gaimardi
state_or_region	Tasmania
tissue_number	ABTC83758
tissue_preservation	frozen
totalmapped2tgt	0.3102
totalpaired	0.2697
totalreadsstart	2778566
voucher_number	no voucher
voucher_or_tissue_number	ABTC83758
wild_captive	wild