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Australian marsupial phylogenetic study. Bioplatforms Australia and Oz Mammals Genomics.

Identifiers
BioSample: SAMEA7320992; SRA: ERS5079528
Organism
Neophascogale lorentzii (long-clawed marsupial mouse)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Dasyuromorphia; Dasyuridae; Neophascogale
Attributes
geographic locationPapua New Guinea
investigation typephylogenetic study
sample name40083
sexnot determined
tissueheart | kidney | liver
BPA_library_ID52714
BPA_sample_ID40083
CALLABLE1276738
DNA extraction methodsalting out
ENA first public2021-01-05
ENA last update2020-09-25
ENA-CHECKLISTERC000011
External IdSAMEA7320992
INSDC center aliasAUSTRALIAN NATIONAL UNIVERSITY
INSDC center nameAUSTRALIAN NATIONAL UNIVERSITY
INSDC first public2021-01-05T04:27:28Z
INSDC last update2020-09-25T00:33:25Z
INSDC statuspublic
LOW_COVERAGE74659
NO_COVERAGE617
ReadLength100bp
Submitter Id40083
TCCP_ID40083_LANES3
bioproject_accessionPRJEB39788
classMammalia
collectionMammal
common namelong-clawed marsupial mouse
decimal_latitude-5.48
decimal_longitude143.13
depthmean295.44
depthmedian64
familyDasyuridae
genusNeophascogale
geographic location (region and locality)Enga Province
institution_nameAustralian Biological Tissue Collection, South Australian Museum
location_textW Placer Mining Camp, near Porgera
orderDasyuromorphia
phylumChordata
sequencing methodIllumina SBS, short PE reads
specieslorentzii
state_or_regionEnga Province
tissue_numberABTC51449
tissue_preservationfrozen
totalmapped2tgt0.5455
totalpaired0.4835
totalreadsstart8427890
voucher_numberAM M.29757
voucher_or_tissue_numberAM M.29757
wild_captivewild
BioProject
PRJEB39788 Australian marsupial phylogeny
Retrieve all samples from this project

Submission
EBI; 2021-01-06
Accession:
SAMEA7320992
ID:
17239449

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