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Australian marsupial phylogenetic study. Bioplatforms Australia and Oz Mammals Genomics.

Identifiers
BioSample: SAMEA7320988; SRA: ERS5079524
Organism
Sminthopsis hirtipes (hairy-footed dunnart)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Dasyuromorphia; Dasyuridae; Sminthopsis
Attributes
geographic locationAustralia
investigation typephylogenetic study
sample name40079
sexnot determined
tissueliver
AtlasLivingAustraliahttps://biocache.ala.org.au/occurrences/69430ac5-d94d-4fcc-bbb5-6e47d9d0b725
BPA_library_ID52710
BPA_sample_ID40079
CALLABLE377762
DNA extraction methodsalting out
ENA first public2021-01-05
ENA last update2020-09-25
ENA-CHECKLISTERC000011
External IdSAMEA7320988
INSDC center aliasAUSTRALIAN NATIONAL UNIVERSITY
INSDC center nameAUSTRALIAN NATIONAL UNIVERSITY
INSDC first public2021-01-05T04:27:28Z
INSDC last update2020-09-25T00:33:17Z
INSDC statuspublic
LOW_COVERAGE80346
NO_COVERAGE34
ReadLength100bp
Submitter Id40079
TCCP_ID40079_LANES3
bioproject_accessionPRJEB39788
classMammalia
collectionMammal
common namehairy-footed dunnart
decimal_latitude-27.34
decimal_longitude130.23
depthmean102.34
depthmedian12
familyDasyuridae
genusSminthopsis
geographic location (region and locality)South Australia
institution_nameAustralian Biological Tissue Collection, South Australian Museum
location_textPitjantjatjara Lands, near Mount Cheesman, 13.2 km NW, site code PIL0101
orderDasyuromorphia
phylumChordata
sequencing methodIllumina SBS, short PE reads
specieshirtipes
state_or_regionSouth Australia
tissue_numberABTC42101
tissue_preservationfrozen
totalmapped2tgt0.2699
totalpaired0.2144
totalreadsstart2161004
voucher_numberSAMA M19441
voucher_or_tissue_numberSAMA M19441
wild_captivewild
BioProject
PRJEB39788 Australian marsupial phylogeny
Retrieve all samples from this project

Submission
EBI; 2021-01-06
Accession:
SAMEA7320988
ID:
17239445

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