Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Sminthopsis hirtipes (hairy-footed dunnart)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Dasyuromorphia; Dasyuridae; Sminthopsis

Attributes

geographic location	Australia
investigation type	phylogenetic study
sample name	40079
sex	not determined
tissue	liver
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/69430ac5-d94d-4fcc-bbb5-6e47d9d0b725
BPA_library_ID	52710
BPA_sample_ID	40079
CALLABLE	377762
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:28Z
ENA-LAST-UPDATE	2020-09-25T00:33:17Z
External Id	SAMEA7320988
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:28Z
INSDC last update	2020-09-25T00:33:17Z
INSDC status	public
LOW_COVERAGE	80346
NO_COVERAGE	34
ReadLength	100bp
Submitter Id	40079
TCCP_ID	40079_LANES3
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	hairy-footed dunnart
decimal_latitude	-27.34
decimal_longitude	130.23
depthmean	102.34
depthmedian	12
family	Dasyuridae
genus	Sminthopsis
geographic location (region and locality)	South Australia
institution_name	Australian Biological Tissue Collection, South Australian Museum
location_text	Pitjantjatjara Lands, near Mount Cheesman, 13.2 km NW, site code PIL0101
order	Dasyuromorphia
phylum	Chordata
scientific_name	Sminthopsis hirtipes
sequencing method	Illumina SBS, short PE reads
species	hirtipes
state_or_region	South Australia
tissue_number	ABTC42101
tissue_preservation	frozen
totalmapped2tgt	0.2699
totalpaired	0.2144
totalreadsstart	2161004
voucher_number	SAMA M19441
voucher_or_tissue_number	SAMA M19441
wild_captive	wild