This sample represents a MAG derived from the meta... - BioSample

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Result Filters

Organism: Sphaerochaetaceae bacterium
cellular organisms; Bacteria; Spirochaetota; Spirochaetia; Spirochaetales; Sphaerochaetaceae; unclassified Sphaerochaetaceae

Attributes

broad-scale environmental context	hominid body
collection date	2011
environmental medium	feces
geographic location	Uganda
investigation type	metagenome-assembled genome
isolation source	Feces of Gorilla beringei beringei
sample name	H07631-L1_cleanbin_000073
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2023-11-07T00:47:28Z
ENA-LAST-UPDATE	2023-11-07T00:47:28Z
External Id	SAMEA114586677
INSDC center name	ICMB
INSDC first public	2023-11-07T00:47:28Z
INSDC last update	2023-11-07T00:47:28Z
INSDC status	public
Submitter Id	H07631-L1_cleanbin_000073
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	spades
binning parameters	refined binning from maxbin2 metabat2 vamb and concoct
binning software	MAGSCoT
completeness score	58.33
completeness software	MAGSCoT
contamination score	1.67
contamination software	MAGSCoT
geographic location (latitude)	not collected
geographic location (longitude)	not collected
local environmental context	hominid gut
metagenomic source	Gorilla beringei gut
sample derived from	SAMN17312171
scientific_name	Sphaerochaetaceae bacterium
taxonomic classification	gtdtbk
taxonomic identity marker	gtdtbtk marker gene sets