This sample represents a MAG derived from the meta... - BioSample

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Result Filters

Organism: Desulfovibrionaceae bacterium
cellular organisms; Bacteria; Thermodesulfobacteriota; Desulfovibrionia; Desulfovibrionales; Desulfovibrionaceae; unclassified Desulfovibrionaceae

Attributes

broad-scale environmental context	hominid body
collection date	2017
environmental medium	feces
geographic location	Democratic Republic of the Congo
investigation type	metagenome-assembled genome
isolation source	Feces of Pan paniscus
sample name	H07656-L1_cleanbin_000009
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2023-11-07T00:47:04Z
ENA-LAST-UPDATE	2023-11-07T00:47:04Z
External Id	SAMEA114587812
INSDC center name	ICMB
INSDC first public	2023-11-07T00:47:04Z
INSDC last update	2023-11-07T00:47:04Z
INSDC status	public
Submitter Id	H07656-L1_cleanbin_000009
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	spades
binning parameters	refined binning from maxbin2 metabat2 vamb and concoct
binning software	MAGSCoT
completeness score	88.33
completeness software	MAGSCoT
contamination score	2.5
contamination software	MAGSCoT
geographic location (latitude)	not collected
geographic location (longitude)	not collected
local environmental context	hominid gut
metagenomic source	Pan paniscus gut
sample derived from	SAMN17312193
scientific_name	Desulfovibrionaceae bacterium
taxonomic classification	gtdtbk
taxonomic identity marker	gtdtbtk marker gene sets