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Human gut genome

Identifiers
BioSample: SAMEA5851873; SRA: ERS3640399
Organism
Clostridioides difficile
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Clostridia; Peptostreptococcales; Peptostreptococcaceae; Clostridioides
Attributes
broad-scale environmental contexthuman-associated habitat
local-scale environmental contexthuman gut
geographic locationUSA
investigation typeisolate
isolation sourcehuman gut
project nameHuman gut genomes
sample nameMGYG-HGUT-02369
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2019-08-06T09:56:39Z
ENA-LAST-UPDATE2019-08-06T09:56:39Z
External IdSAMEA5851873
INSDC center nameEMG
INSDC first public2019-08-06T09:56:39Z
INSDC last update2019-08-06T09:56:39Z
INSDC statuspublic
Submitter IdMGYG-HGUT-02369
broker nameEBI-EMG
common nameClostridioides difficile
completeness score99.51
contamination score0.37
sample derived fromSAMN08104991
scientific_nameClostridioides difficile
BioProject
PRJEB33885 The Unified Human Gastrointestinal Genome catalogue
Retrieve all samples from this project

Submission
EBI; 2019-08-07
Accession:
SAMEA5851873
ID:
12520871

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