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Human gut genome

Identifiers
BioSample: SAMEA5853794; SRA: ERS3642317
Organism
uncultured Lactobacillus sp.
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; environmental samples
Attributes
broad-scale environmental contexthuman-associated habitat
local-scale environmental contexthuman gut
geographic locationChina
investigation typemetagenome
isolation sourcehuman gut
project nameHuman gut genomes
sample nameMGYG-HGUT-04287
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2019-08-06T09:57:09Z
ENA-LAST-UPDATE2019-08-09T12:56:30Z
External IdSAMEA5853794
INSDC center nameEMG
INSDC first public2019-08-06T09:57:09Z
INSDC last update2019-08-09T12:56:30Z
INSDC statuspublic
Submitter IdMGYG-HGUT-04287
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
broker nameEBI-EMG
common nameuncultured Lactobacillus sp.
completeness score88.86
contamination score2.17
metagenomic sourcehuman gut metagenome
sample derived fromnot provided
scientific_nameuncultured Lactobacillus sp.
BioProject
PRJEB33885 The Unified Human Gastrointestinal Genome catalogue
Retrieve all samples from this project

Submission
EBI; 2019-08-07
Accession:
SAMEA5853794
ID:
12522824

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