Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Cercartetus lepidus
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Diprotodontia; Burramyidae; Cercartetus

Attributes

geographic location	Australia
investigation type	phylogenetic study
sample name	40077
sex	not determined
tissue	liver
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/bb1e0b35-a392-4fb1-a7f0-7ba1f2e33a47
BPA_library_ID	52708
BPA_sample_ID	40077
CALLABLE	1616256
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:28Z
ENA-LAST-UPDATE	2020-09-25T00:33:13Z
External Id	SAMEA7320986
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:28Z
INSDC last update	2020-09-25T00:33:13Z
INSDC status	public
LOW_COVERAGE	139574
NO_COVERAGE	29
ReadLength	100bp
Submitter Id	40077
TCCP_ID	40077_LANES3
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	Little pygmy-possum
decimal_latitude	-36.95
decimal_longitude	140.07
depthmean	184.71
depthmedian	107
family	Burramyidae
genus	Cercartetus
geographic location (region and locality)	South Australia
institution_name	Australian Biological Tissue Collection, South Australian Museum
location_text	Near Mount Scott, 16.2km S, site code MIN01401
order	Diprotodontia
phylum	Chordata
scientific_name	Cercartetus lepidus
sequencing method	Illumina SBS, short PE reads
species	lepidus
state_or_region	South Australia
tissue_number	ABTC37759
tissue_preservation	frozen
totalmapped2tgt	0.5667
totalpaired	0.494
totalreadsstart	6343963
voucher_number	SAMA M19329
voucher_or_tissue_number	SAMA M19329
wild_captive	wild