Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Pseudantechinus woolleyae (Woolley's pseudantechinus)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Dasyuromorphia; Dasyuridae; Pseudantechinus

Attributes

geographic location	Australia
investigation type	phylogenetic study
sample name	40087
sex	not determined
tissue	kidney \| liver
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/66c5c833-cef9-4cac-8cc0-598216b4baa4
BPA_library_ID	52718
BPA_sample_ID	40087
CALLABLE	956521
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:28Z
ENA-LAST-UPDATE	2020-09-25T00:33:32Z
External Id	SAMEA7320996
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:28Z
INSDC last update	2020-09-25T00:33:32Z
INSDC status	public
LOW_COVERAGE	43400
NO_COVERAGE	220
ReadLength	100bp
Submitter Id	40087
TCCP_ID	40087_LANES3
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	Woolley's pseudantechinus
depthmean	287.13
depthmedian	113
family	Dasyuridae
genus	Pseudantechinus
geographic location (region and locality)	Western Australia
institution_name	Australian Biological Tissue Collection, South Australian Museum
location_text	Woodstock Station
order	Dasyuromorphia
phylum	Chordata
scientific_name	Pseudantechinus woolleyae
sequencing method	Illumina SBS, short PE reads
species	woolleyae
state_or_region	Western Australia
tissue_number	ABTC62201
tissue_preservation	frozen
totalmapped2tgt	0.4855
totalpaired	0.4358
totalreadsstart	7017365
voucher_number	WAM M34268
voucher_or_tissue_number	WAM M34268
wild_captive	wild