Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Echymipera rufescens (long-nosed echymipera)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Peramelemorphia; Peroryctidae; Echymipera

Attributes

geographic location	Papua New Guinea
investigation type	phylogenetic study
sample name	52902
sex	not determined
tissue	muscle
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/0bb373d8-85f7-4522-9b7e-c83e27a0ddb9
BPA_library_ID	52902
BPA_sample_ID	40274
CALLABLE	1524110
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:29Z
ENA-LAST-UPDATE	2020-09-25T00:35:05Z
External Id	SAMEA7321045
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:29Z
INSDC last update	2020-09-25T00:35:05Z
INSDC status	public
LOW_COVERAGE	156409
NO_COVERAGE	155
ReadLength	100bp
Submitter Id	52902
TCCP_ID	52902_AH5VVVBCX2_AGAATTA_S81
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammalogy
common name	long-nosed echymipera
decimal_latitude	-9.4
decimal_longitude	150.43
depthmean	97.43
depthmedian	40
family	Peramelidae
genus	Echymipera
geographic location (region and locality)	Milne Bay Province
institution_name	Australian Museum
location_text	Fergusson Island Ilaila Village
order	Peramelemorphia
phylum	Chordata
scientific_name	Echymipera rufescens
sequencing method	Illumina SBS, short PE reads
species	rufescens
state_or_region	Milne Bay Province
tissue_number	EBU9111
tissue_preservation	frozen
totalmapped2tgt	0.7166
totalpaired	0.6577
totalreadsstart	2536642
voucher_number	AM M.27903.001
voucher_or_tissue_number	AM M.27903.001