Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Isoodon fusciventer
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Peramelemorphia; Peramelidae; Isoodon

Attributes

geographic location	Australia
identified by	Norah K Cooper
investigation type	phylogenetic study
sample name	52914
sex	not determined
tissue	toe pad
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/ebcc1c36-1068-4988-a9bb-0ca0ddbb2646
BPA_library_ID	52914
BPA_sample_ID	40286
CALLABLE	1367706
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:29Z
ENA-LAST-UPDATE	2020-09-25T00:35:25Z
External Id	SAMEA7321057
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:29Z
INSDC last update	2020-09-25T00:35:25Z
INSDC status	public
LOW_COVERAGE	150482
NO_COVERAGE	123
ReadLength	100bp
Submitter Id	52914
TCCP_ID	52914_AH5VVVBCX2_GACTTCT_S93
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	Quenda
decimal_latitude	-31.93
decimal_longitude	115.97
depthmean	51.04
depthmedian	24
family	Peramelidae
genus	Isoodon
geographic location (region and locality)	Western Australia
institution_name	Western Australian Museum
location_text	Perth Airport
order	Peramelemorphia
phylum	Chordata
scientific_name	Isoodon fusciventer
sequencing method	Illumina SBS, short PE reads
species	fusciventer
state_or_region	Western Australia
tissue_number	WAM M55169
tissue_preservation	ethanol
totalmapped2tgt	0.6516
totalpaired	0.5589
totalreadsstart	1385002
voucher_number	WAM M55169
voucher_or_tissue_number	WAM M55169