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Australian marsupial phylogenetic study. Bioplatforms Australia and Oz Mammals Genomics.

Identifiers
BioSample: SAMEA7321067; Sample name: 53346; SRA: ERS5079603
Organism
Lagorchestes hirsutus (rufous hare-wallaby)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Diprotodontia; Macropodidae; Lagorchestes
Attributes
investigation typephylogenetic study
geographic locationAustralia
tissueear epithelium
sub speciesbernieri
identified byNeil Thomas | DBCA
sexfemale
bioproject_accessionPRJEB39788
sequencing methodIllumina SBS, short PE reads
geographic location (region and locality)Western Australia
BPA_sample_ID40354
BPA_library_ID53346
voucher_numberno voucher
tissue_numberDEC02855
voucher_or_tissue_numberDEC02855
institution_nameDepartment of Biodiversity, Conservation and Attractions
collectionMammal
tissue_preservationethanol
phylumChordata
classMammalia
orderDiprotodontia
familyMacropodidae
genusLagorchestes
specieshirsutus
wild_captivewild
state_or_regionWestern Australia
location_textBernier Island
decimal_latitude-24.93
decimal_longitude113.14
DNA_extraction_methodsalting out
TCCP_ID53346_AHGVYGBCX2_CTCGATG_S7
depthmean61.97
depthmedian52
totalreadsstart4382801
totalmapped2tgt0.3177
totalpaired0.2965
CALLABLE1833824
NO_COVERAGE219
LOW_COVERAGE185189
ReadLength100bp
AtlasLivingAustraliaNA
ENA-FIRST-PUBLIC2021-01-05
ENA-LAST-UPDATE2020-09-25
BioProject
PRJEB39788 Australian marsupial phylogeny
Retrieve all samples from this project

Submission
EBI; 2021-01-06
Accession:
SAMEA7321067
ID:
17239524

BioProject Nucleotide

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