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Australian marsupial phylogenetic study. Bioplatforms Australia and Oz Mammals Genomics.

Identifiers
BioSample: SAMEA7321074; Sample name: 53353; SRA: ERS5079610
Organism
Lagorchestes hirsutus (rufous hare-wallaby)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Diprotodontia; Macropodidae; Lagorchestes
Attributes
investigation typephylogenetic study
geographic locationAustralia
tissueear epithelium
sub speciesbernieri
identified byNeil Thomas | DBCA
sexmale
bioproject_accessionPRJEB39788
sequencing methodIllumina SBS, short PE reads
geographic location (region and locality)Western Australia
BPA_sample_ID40367
BPA_library_ID53353
voucher_numberno voucher
tissue_numberDEC02873
voucher_or_tissue_numberDEC02873
institution_nameDepartment of Biodiversity, Conservation and Attractions
collectionMammal
tissue_preservationethanol
phylumChordata
classMammalia
orderDiprotodontia
familyMacropodidae
genusLagorchestes
specieshirsutus
wild_captivewild
state_or_regionWestern Australia
location_textDorre Island
decimal_latitude-25.18
decimal_longitude113.09
DNA_extraction_methodsalting out
TCCP_ID53353_AHGVYGBCX2_CGACCTG_S15
depthmean34.48
depthmedian31
totalreadsstart2220200
totalmapped2tgt0.3215
totalpaired0.3029
CALLABLE1676637
NO_COVERAGE102
LOW_COVERAGE203329
ReadLength100bp
AtlasLivingAustraliaNA
ENA-FIRST-PUBLIC2021-01-05
ENA-LAST-UPDATE2020-09-25
BioProject
PRJEB39788 Australian marsupial phylogeny
Retrieve all samples from this project

Submission
EBI; 2021-01-06
Accession:
SAMEA7321074
ID:
17239531

BioProject Nucleotide

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