Australian marsupial phylogenetic study. Bioplatfo... - BioSample

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Organism: Lagorchestes hirsutus (rufous hare-wallaby)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Diprotodontia; Macropodidae; Lagorchestes

Attributes

investigation type	phylogenetic study
geographic location	Australia
tissue	ear epithelium
sub species	central australia
identified by	Leah Kemp \| AWC
sex	female
bioproject_accession	PRJEB39788
sequencing method	Illumina SBS, short PE reads
geographic location (region and locality)	New South Wales
BPA_sample_ID	40474
BPA_library_ID	53387
voucher_number	no voucher
tissue_number	DEC03022
voucher_or_tissue_number	DEC03022
institution_name	Department of Biodiversity, Conservation and Attractions
collection	Mammal
tissue_preservation	ethanol
phylum	Chordata
class	Mammalia
order	Diprotodontia
family	Macropodidae
genus	Lagorchestes
species	hirsutus
wild_captive	captive
state_or_region	New South Wales
location_text	Scotia Sanctuary enclosure
decimal_latitude	-33.19
decimal_longitude	141.18
DNA_extraction_method	salting out
TCCP_ID	53387_AHGVYGBCX2_ATACTGA_S59
depthmean	36.57
depthmedian	31
totalreadsstart	3093026
totalmapped2tgt	0.2809
totalpaired	0.2602
CALLABLE	1918871
NO_COVERAGE	235
LOW_COVERAGE	203953
ReadLength	100bp
AtlasLivingAustralia	NA
ENA-FIRST-PUBLIC	2021-01-05
ENA-LAST-UPDATE	2020-09-25