Australian marsupial phylogenetic study. Bioplatfo... - BioSample

Australian marsupial phylogenetic study. Bioplatforms Australia and Oz Mammals Genomics.

Organism: Petrogale concinna canescens
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Diprotodontia; Macropodidae; Petrogale; Petrogale concinna

Attributes

geographic location	Australia
identified by	Gordon D Sanson \| J. E. Nelson
investigation type	phylogenetic study
sample name	53435
sex	female
sub species	canescens
tissue	fibroblasts
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/8b7b1bbc-27a7-40d0-a347-56d636c6fad1
BPA_library_ID	53435
BPA_sample_ID	40726
CALLABLE	2131054
DNA extraction method	phenol/chloroform
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:30Z
ENA-LAST-UPDATE	2020-09-25T00:37:57Z
External Id	SAMEA7321153
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:30Z
INSDC last update	2020-09-25T00:37:57Z
INSDC status	public
LOW_COVERAGE	216850
NO_COVERAGE	98
ReadLength	100bp
Submitter Id	53435
TCCP_ID	53435_AHGVYVBCX2_TCGCAGG_S1
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammalogy
common name	Nabarlek
decimal_latitude	-12.05
decimal_longitude	132.9
depthmean	70.81
depthmedian	52
family	Macropodidae
genus	Petrogale
geographic location (region and locality)	Northern Territory
institution_name	Australian Museum
location_text	Mount Borrodaile
order	Diprotodontia
phylum	Chordata
scientific_name	Petrogale concinna canescens
sequencing method	Illumina SBS, short PE reads
species	concinna
state_or_region	Northern Territory
tissue_number	EBU35578
tissue_preservation	frozen
totalmapped2tgt	0.767
totalpaired	0.7349
totalreadsstart	2226060
voucher_number	AM M.43302.001
voucher_or_tissue_number	AM M.43302.001
wild_captive	wild

BioProject: PRJEB39788 Australian marsupial phylogeny
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