Australian marsupial phylogenetic study. Bioplatfo... - BioSample

Australian marsupial phylogenetic study. Bioplatforms Australia and Oz Mammals Genomics.

Organism: Petrogale xanthopus xanthopus
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Diprotodontia; Macropodidae; Petrogale; Petrogale xanthopus

Attributes

geographic location	Australia
identified by	Geoffrey B Sharman
investigation type	phylogenetic study
sample name	53442
sex	female
sub species	xanthopus
tissue	blood
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/d488c765-add6-43a8-bc76-43fc3b24beb9
BPA_library_ID	53442
BPA_sample_ID	40733
CALLABLE	2285620
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:29Z
ENA-LAST-UPDATE	2020-09-25T00:38:09Z
External Id	SAMEA7321160
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:29Z
INSDC last update	2020-09-25T00:38:09Z
INSDC status	public
LOW_COVERAGE	212584
NO_COVERAGE	280
ReadLength	100bp
Submitter Id	53442
TCCP_ID	53442_AHGVYVBCX2_GCTCGAA_S8
bioproject_accession	PRJEB39788
class	Mammalia
collection	EBU
common name	Yellow-footed rock-wallaby
decimal_latitude	-31.05
decimal_longitude	142.08
depthmean	124
depthmedian	66
family	Macropodidae
genus	Petrogale
geographic location (region and locality)	New South Wales
institution_name	Australian Museum
location_text	Cootawundi Station
order	Diprotodontia
phylum	Chordata
scientific_name	Petrogale xanthopus xanthopus
sequencing method	Illumina SBS, short PE reads
species	xanthopus
state_or_region	New South Wales
tissue_number	RW307
tissue_preservation	frozen
totalmapped2tgt	0.7555
totalpaired	0.7205
totalreadsstart	4210876
voucher_number	ANWC M05793
voucher_or_tissue_number	ANWC M05793
wild_captive	wild

BioProject: PRJEB39788 Australian marsupial phylogeny
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