Australian marsupial phylogenetic study. Bioplatfo... - BioSample

Australian marsupial phylogenetic study. Bioplatforms Australia and Oz Mammals Genomics.

Organism: Petrogale brachyotis victoriae
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Diprotodontia; Macropodidae; Petrogale; Petrogale brachyotis

Attributes

geographic location	Australia
identified by	Gerald M Maynes
investigation type	phylogenetic study
sample name	53480
sex	male
sub species	victoriae
tissue	liver
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/b6361c51-fc6f-4f19-88a1-c559e76f64bc
BPA_library_ID	53480
BPA_sample_ID	40771
CALLABLE	2121135
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:29Z
ENA-LAST-UPDATE	2020-09-25T00:39:10Z
External Id	SAMEA7321199
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:29Z
INSDC last update	2020-09-25T00:39:10Z
INSDC status	public
LOW_COVERAGE	221311
NO_COVERAGE	180
ReadLength	100bp
Submitter Id	53480
TCCP_ID	53480_AHGVYVBCX2_GTACCGG_S46
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammalogy
common name	Short-eared rock-wallaby
decimal_latitude	-15.2
decimal_longitude	129.85
depthmean	82.75
depthmedian	54
family	Macropodidae
genus	Petrogale
geographic location (region and locality)	Northern Territory
institution_name	Australian Museum
location_text	Goobaieri Bay, Bradshaw
order	Diprotodontia
phylum	Chordata
scientific_name	Petrogale brachyotis victoriae
sequencing method	Illumina SBS, short PE reads
species	brachyotis
state_or_region	Northern Territory
tissue_number	S305
tissue_preservation	frozen
totalmapped2tgt	0.7829
totalpaired	0.7517
totalreadsstart	2552181
voucher_number	AM M.45283.001
voucher_or_tissue_number	AM M.45283.001
wild_captive	wild

BioProject: PRJEB39788 Australian marsupial phylogeny
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