Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Lagorchestes conspicillatus (spectacled hare-wallaby)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Diprotodontia; Macropodidae; Lagorchestes

Attributes

geographic location	Australia
identified by	Graham Hall
investigation type	phylogenetic study
sample name	53528
sex	not determined
tissue	blood
BPA_library_ID	53528
BPA_sample_ID	40819
CALLABLE	2170888
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:29Z
ENA-LAST-UPDATE	2020-09-25T00:39:58Z
External Id	SAMEA7321227
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:29Z
INSDC last update	2020-09-25T00:39:58Z
INSDC status	public
LOW_COVERAGE	269563
NO_COVERAGE	345
ReadLength	100bp
Submitter Id	53528
TCCP_ID	53528_AHGVYVBCX2_GTACTAT_S94
bioproject_accession	PRJEB39788
class	Mammalia
collection	EBU
common name	spectacled hare-wallaby
depthmean	52.02
depthmedian	35
family	Macropodidae
genus	Lagorchestes
geographic location (region and locality)	Western Australia
institution_name	Australian Museum
location_text	Barrow Island
order	Diprotodontia
phylum	Chordata
scientific_name	Lagorchestes conspicillatus
sequencing method	Illumina SBS, short PE reads
species	conspicillatus
state_or_region	Western Australia
tissue_number	SHW1164
tissue_preservation	frozen
totalmapped2tgt	0.7679
totalpaired	0.7307
totalreadsstart	1708686
voucher_number	no voucher
voucher_or_tissue_number	SHW1164
wild_captive	wild