Australian marsupial phylogenetic study. Bioplatfo... - BioSample

Australian marsupial phylogenetic study. Bioplatforms Australia and Oz Mammals Genomics.

Organism: Lagorchestes conspicillatus (spectacled hare-wallaby)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Diprotodontia; Macropodidae; Lagorchestes

Attributes

geographic location	Australia
identified by	Geoff Lundie Jenkins
investigation type	phylogenetic study
sample name	53530
sex	male
tissue	muscle
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/60141ffd-d15c-4eed-adac-e82349f07b8f
BPA_library_ID	53530
BPA_sample_ID	40821
CALLABLE	2137006
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:29Z
ENA-LAST-UPDATE	2020-09-25T00:40:02Z
External Id	SAMEA7321229
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:29Z
INSDC last update	2020-09-25T00:40:02Z
INSDC status	public
LOW_COVERAGE	231479
NO_COVERAGE	659
ReadLength	100bp
Submitter Id	53530
TCCP_ID	53530_AHGVYVBCX2_CGCAGCC_S96
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammalogy
common name	spectacled hare-wallaby
decimal_latitude	-20.57
decimal_longitude	130.35
depthmean	122.29
depthmedian	66
family	Macropodidae
genus	Lagorchestes
geographic location (region and locality)	Northern Territory
institution_name	Australian Museum
location_text	5km W of Granites gold mine
order	Diprotodontia
phylum	Chordata
scientific_name	Lagorchestes conspicillatus
sequencing method	Illumina SBS, short PE reads
species	conspicillatus
state_or_region	Northern Territory
tissue_number	EBU26584
tissue_preservation	frozen
totalmapped2tgt	0.7329
totalpaired	0.7033
totalreadsstart	4191392
voucher_number	AM M.27331
voucher_or_tissue_number	AM M.27331
wild_captive	wild

BioProject: PRJEB39788 Australian marsupial phylogeny
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