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Australian marsupial phylogenetic study. Bioplatforms Australia and Oz Mammals Genomics.

Identifiers
BioSample: SAMEA7321286; Sample name: 55303; SRA: ERS5079821
Organism
Trichosurus vulpecula (common brushtail)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Diprotodontia; Phalangeridae; Trichosurus
Attributes
investigation typephylogenetic study
geographic locationAustralia
tissueliver
sub speciesraui
identified byunknown
sexnot determined
bioproject_accessionPRJEB39788
sequencing methodIllumina SBS, short PE reads
geographic location (region and locality)Queensland
BPA_sample_ID41892
BPA_library_ID55303
voucher_numberno voucher
tissue_numberABTC00018
voucher_or_tissue_numberABTC00018
institution_nameAustralian Biological Tissue Collection, South Australian Museum
collectionMammal
tissue_preservationethanol | frozen
phylumChordata
classMammalia
orderDiprotodontia
familyPhalangeridae
genusTrichosurus
speciesvulpecula
wild_captiveunknown
state_or_regionQueensland
location_textWeipa
decimal_latitudeunknown
decimal_longitudeunknown
DNA_extraction_methodsalting out
TCCP_ID55303_HWWJFAFXY_TCGCAGG_S1
depthmean148.03
depthmedian102
totalreadsstart2914248
totalmapped2tgt0.6529
totalpaired0.6242
CALLABLE1407531
NO_COVERAGE95
LOW_COVERAGE136506
ReadLength150bp
AtlasLivingAustraliahttps://biocache.ala.org.au/occurrences/8b2ff199-312f-4506-b5f6-727ec8292732
ENA-FIRST-PUBLIC2021-01-05
ENA-LAST-UPDATE2020-09-25
BioProject
PRJEB39788 Australian marsupial phylogeny
Retrieve all samples from this project

Submission
EBI; 2021-01-06
Accession:
SAMEA7321286
ID:
17239742

BioProject Nucleotide

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