Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Antechinus flavipes (yellow-footed antechinus)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Dasyuromorphia; Dasyuridae; Antechinus

Attributes

geographic location	Australia
investigation type	phylogenetic study
sample name	55306
sex	female
tissue	liver
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/c960ebe8-45d9-485d-95c3-8ad0726ea8d6
BPA_library_ID	55306
BPA_sample_ID	41895
CALLABLE	1498218
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:28Z
ENA-LAST-UPDATE	2020-09-25T00:41:49Z
External Id	SAMEA7321289
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:28Z
INSDC last update	2020-09-25T00:41:49Z
INSDC status	public
LOW_COVERAGE	139434
NO_COVERAGE	354
ReadLength	150bp
Submitter Id	55306
TCCP_ID	55306_HWWJFAFXY_CATCCGG_S33
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	yellow-footed antechinus
decimal_latitude	-31.02
decimal_longitude	146.68
depthmean	108.33
depthmedian	83
family	Dasyuridae
genus	Antechinus
geographic location (region and locality)	New South Wales
institution_name	Australian Biological Tissue Collection, South Australian Museum
location_text	Near Coolabah
order	Dasyuromorphia
phylum	Chordata
scientific_name	Antechinus flavipes
sequencing method	Illumina SBS, short PE reads
species	flavipes
state_or_region	New South Wales
tissue_number	ABTC07490
tissue_preservation	ethanol \| frozen
totalmapped2tgt	0.7855
totalpaired	0.7749
totalreadsstart	1793407
voucher_number	AM M.11253
voucher_or_tissue_number	AM M.11253