Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Sminthopsis leucopus (white-footed dunnart)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Dasyuromorphia; Dasyuridae; Sminthopsis

Attributes

geographic location	Australia
investigation type	phylogenetic study
sample name	55313
sex	not determined
tissue	liver
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/aaad8974-c4b3-4c65-b1ab-446556529d6f
BPA_library_ID	55313
BPA_sample_ID	41902
CALLABLE	1604219
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:29Z
ENA-LAST-UPDATE	2020-09-25T00:42:00Z
External Id	SAMEA7321296
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:29Z
INSDC last update	2020-09-25T00:42:00Z
INSDC status	public
LOW_COVERAGE	159887
NO_COVERAGE	205
ReadLength	150bp
Submitter Id	55313
TCCP_ID	55313_HWWJFAFXY_ACCAACT_S9
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	white-footed dunnart
depthmean	227.06
depthmedian	140
family	Dasyuridae
genus	Sminthopsis
geographic location (region and locality)	Queensland
institution_name	Australian Biological Tissue Collection, South Australian Museum
location_text	Atherton Tableland region
order	Dasyuromorphia
phylum	Chordata
scientific_name	Sminthopsis leucopus
sequencing method	Illumina SBS, short PE reads
species	leucopus
state_or_region	Queensland
tissue_number	ABTC07811
tissue_preservation	ethanol \| frozen
totalmapped2tgt	0.7646
totalpaired	0.743
totalreadsstart	4200136
voucher_number	no voucher
voucher_or_tissue_number	ABTC07811