Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Pseudochirulus canescens (Lowland ringtail)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Diprotodontia; Pseudocheiridae; Pseudochirulus

Attributes

geographic location	Papua New Guinea
investigation type	phylogenetic study
sample name	55335
sex	male
tissue	liver
BPA_library_ID	55335
BPA_sample_ID	41924
CALLABLE	1289533
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:29Z
ENA-LAST-UPDATE	2020-09-25T00:42:37Z
External Id	SAMEA7321316
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:29Z
INSDC last update	2020-09-25T00:42:37Z
INSDC status	public
LOW_COVERAGE	137657
NO_COVERAGE	114
ReadLength	150bp
Submitter Id	55335
TCCP_ID	55335_HWWJFAFXY_AAGGTCT_S43
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	Lowland ringtail
decimal_latitude	-6.53
decimal_longitude	143.18
depthmean	106.89
depthmedian	73
family	Pseudocheiridae
genus	Pseudochirulus
geographic location (region and locality)	Southern Highlands Province
institution_name	Australian Biological Tissue Collection, South Australian Museum
location_text	Waro
order	Diprotodontia
phylum	Chordata
scientific_name	Pseudochirulus canescens
sequencing method	Illumina SBS, short PE reads
species	canescens
state_or_region	Southern Highlands Province
tissue_number	ABTC46801
tissue_preservation	ethanol \| frozen
totalmapped2tgt	0.6479
totalpaired	0.6147
totalreadsstart	1969390
voucher_number	AM M.17087
voucher_or_tissue_number	AM M.17087