Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Pseudantechinus roryi (Rory Cooper's false Antechinus)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Dasyuromorphia; Dasyuridae; Pseudantechinus

Attributes

geographic location	Australia
identified by	Norah K Cooper
investigation type	phylogenetic study
sample name	55349
sex	male
tissue	liver
BPA_library_ID	55349
BPA_sample_ID	41938
CALLABLE	1545557
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:29Z
ENA-LAST-UPDATE	2020-09-25T00:43:01Z
External Id	SAMEA7321329
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:29Z
INSDC last update	2020-09-25T00:43:01Z
INSDC status	public
LOW_COVERAGE	167728
NO_COVERAGE	202
ReadLength	150bp
Submitter Id	55349
TCCP_ID	55349_HWWJFAFXY_ACTGGAC_S44
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	Rory Cooper's false antechinus
decimal_latitude	-21.62
decimal_longitude	118.96
depthmean	110.73
depthmedian	82
family	Dasyuridae
genus	Pseudantechinus
geographic location (region and locality)	Western Australia
institution_name	Australian Biological Tissue Collection, South Australian Museum
location_text	Port Hedland, Woodstock Station
order	Dasyuromorphia
phylum	Chordata
scientific_name	Pseudantechinus roryi
sequencing method	Illumina SBS, short PE reads
species	roryi
state_or_region	Western Australia
tissue_number	ABTC62203
tissue_preservation	ethanol \| frozen
totalmapped2tgt	0.8032
totalpaired	0.79
totalreadsstart	1838330
voucher_number	WAM M34277
voucher_or_tissue_number	WAM M34277