Australian marsupial phylogenetic study. Bioplatfo... - BioSample

Australian marsupial phylogenetic study. Bioplatforms Australia and Oz Mammals Genomics.

Organism: Sminthopsis dolichura (little long-tailed dunnart)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Dasyuromorphia; Dasyuridae; Sminthopsis

Attributes

geographic location	Australia
identified by	Catherine Kemper \| David Stemmer
investigation type	phylogenetic study
sample name	55360
sex	not determined
tissue	liver
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/301289df-ba4c-4a6a-9a84-f8ffa5a7e2f5
BPA_library_ID	55360
BPA_sample_ID	41949
CALLABLE	1418524
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:29Z
ENA-LAST-UPDATE	2020-09-25T00:43:19Z
External Id	SAMEA7321340
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:29Z
INSDC last update	2020-09-25T00:43:19Z
INSDC status	public
LOW_COVERAGE	134524
NO_COVERAGE	208
ReadLength	150bp
Submitter Id	55360
TCCP_ID	55360_HWWJFAFXY_CAGGAGG_S37
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	little long-tailed dunnart
decimal_latitude	-29.62
decimal_longitude	117.42
depthmean	97.92
depthmedian	72
family	Dasyuridae
genus	Sminthopsis
geographic location (region and locality)	Western Australia
institution_name	Australian Biological Tissue Collection, South Australian Museum
location_text	Mount Gibson South
order	Dasyuromorphia
phylum	Chordata
scientific_name	Sminthopsis dolichura
sequencing method	Illumina SBS, short PE reads
species	dolichura
state_or_region	Western Australia
tissue_number	ABTC82565
tissue_preservation	ethanol \| frozen
totalmapped2tgt	0.7614
totalpaired	0.7482
totalreadsstart	1569656
voucher_number	SAMA M23018
voucher_or_tissue_number	SAMA M23018

BioProject: PRJEB39788 Australian marsupial phylogeny
Retrieve all samples from this project