Pathogen: environmental/food/other sample from Sal... - BioSample - NCBI

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Pathogen: environmental/food/other sample from Salmonella enterica subsp. enterica serovar Agona

Identifiers: BioSample: SAMN03938876; Sample name: VA-WGS-00574; SRA: SRS1107884

Organism: Salmonella enterica subsp. enterica serovar Agona
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica

Package: Pathogen: environmental/food/other; version 1.0

Attributes

isolation source	pork chop
Interagency Food Safety Analytics Collaboration (IFSAC) category	pork
source type	food
collection date	2008
geographic location	USA:NM
isolate name alias	CFSAN036302
latitude and longitude	missing
serovar	Agona
strain	VA-WGS-00574
collected by	FDA
sub species	enterica
NARMS isolate number	CVM N18482
attribute_package	environmental/food/other
ontological term	pork chop food product:foodon_00001049
package	environmental/food/other

BioProject: PRJNA219491 Salmonella enterica
Retrieve all samples from this project

Submission: CFSAN; 2015-07-27

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
amikacin	susceptible	==	2	mg/L	MIC				CLSI
amoxicillin-clavulanic acid	susceptible	==	2/1	mg/L	MIC				CLSI
ampicillin	susceptible	<=	1	mg/L	MIC				CLSI
cefoxitin	susceptible	==	4	mg/L	MIC				CLSI
ceftiofur	susceptible	==	1	mg/L	MIC				CLSI
ceftriaxone	susceptible	<=	0.25	mg/L	MIC				CLSI
chloramphenicol	susceptible	==	8	mg/L	MIC				CLSI
ciprofloxacin	susceptible	==	0.06	mg/L	MIC				CLSI
gentamicin	susceptible	==	2	mg/L	MIC				CLSI
kanamycin	susceptible	<=	8	mg/L	MIC				CLSI
nalidixic acid	susceptible	==	4	mg/L	MIC				CLSI
streptomycin	susceptible	<=	32	mg/L	MIC				NARMS
sulfisoxazole	resistant	>	256	mg/L	MIC				CLSI
tetracycline	resistant	>	32	mg/L	MIC				CLSI
trimethoprim-sulfamethoxazole	susceptible	==	0.5/9.6	mg/L	MIC				CLSI

Accession:: SAMN03938876
ID:: 3938876

BioProject SRA Nucleotide

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