Metagenome or environmental sample from activated ... - BioSample

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Result Filters

Identifiers: BioSample: SAMN04254537; Sample name: A2_filter_metagenome_assembly

Organism: activated carbon metagenome
unclassified entries; unclassified sequences; metagenomes; ecological metagenomes

Attributes

isolation source	dual media filters at the Ann Arbor, Michigan drinking water treatment plant
latitude and longitude	42.2814 N 83.74829999 W
collection date	not applicable
sample material processing	DNA extraction - see 0.1021/es302042t for details
biomaterial provider	Lutgarde Raskin, University of Michigan
geographic location	USA: Ann Arbor
sample collection device or method	direct collection of filter media
metagenomic	TRUE
environmental-sample	TRUE
note	This sample group is the combination of the 4 individual BioSamples: SAMN04231398, SAMN04231399, SAMN04231400, and SAMN04231401.

Description: This is the master assembly (scaffolds) generated using reads from the following BioSamples: SAMN04231398, SAMN04231399, SAMN04231400, and SAMN04231401. The assembly was generated using IDBA_UD (version 1.1.1). All scaffolds less than 1kb have been discarded and for the purposes of submission the scaffolds have been split into contigs. The sequence headers are as follows: scaffold_X.Y, where X represents scaffold number and Y represents contig order within scaffold.