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Microbe sample from Nitrospirota bacterium

Identifiers
BioSample: SAMN09638477; Sample name: Uncultivated Nitrospirae bacterium HyVt-294 genome recovered from DRR093004; SRA: SRS3740236
Organism
Nitrospirota bacterium
cellular organisms; Bacteria; Nitrospirota; unclassified Nitrospirota
Package
Microbe; version 1.0
Attributes
isolateHyVt-294
isolation sourcemarine hydrothermal vent chimney sediment
collection date2010-06-16
geographic locationPacific Ocean:Southern Mariana Trough
sample typemetagenomic assembly
latitude and longitude12.93 N 143.62 E
subsource noteMetagenome-assembled genome binned from sequencing reads available in DRR093004
metagenome sourcemarine metagenome
assembly_method_and_versionMEGAHIT v1.1.2
completeness_estimated51.91
contamination_estimated7.76
quality_assessment_method_and_versionCheckM v1.0.7
environmental-sampletrue
genome_coverage11.04
mapping_method_and_versionBowtie 2 v2.2.8
metagenomictrue
BioProject
PRJNA480137 metagenomes
Retrieve all samples from this project

Submission
The University of Hong Kong, Zhichao Zhou; 2018-07-11
Accession:
SAMN09638477
ID:
9638477

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