U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Microbe sample from Candidatus Omnitrophota bacterium

Identifiers
BioSample: SAMN09638488; Sample name: Uncultivated Candidatus Omnitrophica bacterium HyVt-303 genome recovered from DRR093005; SRA: SRS3740409
Organism
Candidatus Omnitrophota bacterium
cellular organisms; Bacteria; PVC group; Candidatus Omnitrophota; unclassified Candidatus Omnitrophota
Package
Microbe; version 1.0
Attributes
isolateHyVt-303
isolation sourcemarine hydrothermal vent chimney sediment
collection date2010-06-16
geographic locationPacific Ocean:Southern Mariana Trough
sample typemetagenomic assembly
latitude and longitude12.93 N 143.62 E
subsource noteMetagenome-assembled genome binned from sequencing reads available in DRR093005
metagenome sourcemarine metagenome
assembly_method_and_versionMEGAHIT v1.1.2
completeness_estimated59.06
contamination_estimated0.16
quality_assessment_method_and_versionCheckM v1.0.7
environmental-sampletrue
genome_coverage11.7
mapping_method_and_versionBowtie 2 v2.2.8
metagenomictrue
BioProject
PRJNA480137 metagenomes
Retrieve all samples from this project

Submission
The University of Hong Kong, Zhichao Zhou; 2018-07-11
Accession:
SAMN09638488
ID:
9638488

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center