Microbe sample from Methylophaga sp. - BioSample - NCBI

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Microbe sample from Methylophaga sp.

Identifiers: BioSample: SAMN09638521; Sample name: Uncultivated Methylophaga sp. HyVt-333 genome recovered from SRR1555743 and SRR1555748; SRA: SRS3740284

Organism: Methylophaga sp.
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga; unclassified Methylophaga

Package: Microbe; version 1.0

Attributes

isolate	HyVt-333
isolation source	Loki non-amplified sample from Loki's castle hydrothermal vent sediment
collection date	2010
geographic location	Arctic Ocean: Gakkel Ridge
sample type	metagenomic assembly
latitude and longitude	73.763167 N 8.464000 E
subsource note	Metagenome-assembled genome binned from sequencing reads available in SRR1555743 and SRR1555748
metagenome source	marine sediment metagenome
assembly_method_and_version	MEGAHIT v1.1.2
completeness_estimated	56.47
contamination_estimated	4.45
quality_assessment_method_and_version	CheckM v1.0.7
environmental-sample	true
genome_coverage	1.29
mapping_method_and_version	Bowtie 2 v2.2.8
metagenomic	true

BioProject: PRJNA480137 metagenomes
Retrieve all samples from this project

Submission: The University of Hong Kong, Zhichao Zhou; 2018-07-11

Accession:: SAMN09638521
ID:: 9638521

BioProject SRA Nucleotide

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