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Microbe sample from Candidatus Portnoybacteria bacterium

Identifiers
BioSample: SAMN09638563; Sample name: Uncultivated Candidatus Portnoybacteria bacterium HyVt-371 genome recovered from SRR1555744; SRA: SRS3740662
Organism
Candidatus Portnoybacteria bacterium
cellular organisms; Bacteria; Bacteria incertae sedis; Bacteria candidate phyla; Patescibacteria group; Parcubacteria group; Candidatus Portnoybacteria; unclassified Candidatus Portnoybacteria
Package
Microbe; version 1.0
Attributes
isolateHyVt-371
isolation sourceLokiAmp MDA-amplified sample from Loki's castle hydrothermal vent sediment
collection date2010
geographic locationArctic Ocean: Gakkel Ridge
sample typemetagenomic assembly
latitude and longitude73.763167 N 8.464000 E
subsource noteMetagenome-assembled genome binned from sequencing reads available in SRR1555744
metagenome sourcemarine sediment metagenome
assembly_method_and_versionMEGAHIT v1.1.2
completeness_estimated31.6
contamination_estimated0
quality_assessment_method_and_versionCheckM v1.0.7
environmental-sampletrue
genome_coverage6.23
mapping_method_and_versionBowtie 2 v2.2.8
metagenomictrue
BioProject
PRJNA480137 metagenomes
Retrieve all samples from this project

Submission
The University of Hong Kong, Zhichao Zhou; 2018-07-11
Accession:
SAMN09638563
ID:
9638563

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